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Molecular Phylogenetics and Evolution|November 5, 2018
Gene-wise resampling outperforms site-wise resampling in phylogenetic coalescence analysesMark P Simmons, Daniel B Sloan, Mark S Springer, et al.
Systematic Biology|March 23, 2006
How can third codon positions outperform first and second codon positions in phylogenetic inference? An empirical example from the seed plantsMark P Simmons, Li-Bing Zhang, Colleen T Webb, et al.
BMC Evolutionary Biology|February 23, 2012
Evaluating multiple criteria for species delimitation: an empirical example using Hawaiian palms (Arecaceae: Pritchardia)Christine D Bacon, Miles J McKenna, Mark P Simmons, et al.
Molecular Phylogenetics and Evolution|April 5, 2011
Molecular phylogenetics of Hypoxidaceae--evidence from plastid DNA data and inferences on morphology and biogeographyAlexander Kocyan, Deirdre A Snijman, Félix Forest, et al.
Plos One|March 8, 2016
The Complete Plastid Genome of Lagerstroemia fauriei and Loss of rpl2 Intron from Lagerstroemia (Lythraceae)Cuihua Gu, Luke R Tembrock, Nels G Johnson, et al.
Molecular Phylogenetics and Evolution|February 23, 2011
Phylogeny of Celastraceae subfamily Hippocrateoideae inferred from morphological characters and nuclear and plastid lociJennifer M Coughenour, Mark P Simmons, Julio A Lombardi, et al.
Cladistics : the International Journal of the Willi Hennig Society|December 11, 2021
The relative performance of Bayesian and parsimony approaches when sampling characters evolving under homogeneous and heterogeneous sets of parametersMark P Simmons, Li-Bing Zhang, Colleen T Webb, et al.
Cladistics : the International Journal of the Willi Hennig Society|April 25, 2023
Quantification of congruence among gene trees with polytomies using overall success of resolution for phylogenomic coalescent analysesMark P Simmons, Pablo A Goloboff, Ben C Stöver, et al.
Molecular Phylogenetics and Evolution|January 22, 2013
Phylogeny of the Asian Hedyotis-Oldenlandia complex (Spermacoceae, Rubiaceae): evidence for high levels of polyphyly and the parallel evolution of diplophragmous capsulesXing Guo, Rui-Jiang Wang, Mark P Simmons, et al.
The Journal of Heredity|December 15, 2019
ILS-Aware Analysis of Low-Homoplasy Retroelement Insertions: Inference of Species Trees and Introgression Using QuartetsMark S Springer, Erin K Molloy, Daniel B Sloan, et al.
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