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Proteins|July 12, 2008
Signaling pathways of PDZ2 domain: a molecular dynamics interaction correlation analysisYifei Kong, Martin KarplusStructure (London, England : 1993)|May 16, 2007
The signaling pathway of rhodopsinYifei Kong, Martin KarplusProceedings of the National Academy of Sciences of the United States of America|May 4, 2010
Protein dynamics investigated by inherent structure analysisFrancesco Rao, Martin KarplusBiophysical Chemistry|March 21, 2003
Thermodynamics of protein folding: a microscopic viewThemis Lazaridis, Martin KarplusThe Journal of Physical Chemistry. B|September 27, 2023
Free Energy Simulations of Receptor-Binding Domain Opening of the SARS-CoV-2 Spike Indicate a Barrierless Transition with Slow Conformational MotionsVictor Ovchinnikov, Martin KarplusJournal of Molecular Biology|November 26, 2002
Binding free energy differences in a TCR-peptide-MHC complex induced by a peptide mutation: a simulation analysisOlivier Michielin, Martin KarplusMethods in Molecular Biology (Clifton, N.J.)|November 8, 2022
A Computational Framework for Determining the Breadth of Antibodies Against Highly Mutable PathogensSimone Conti, Martin KarplusPlos Computational Biology|April 11, 2019
Estimation of the breadth of CD4bs targeting HIV antibodies by molecular modeling and machine learningSimone Conti, Martin KarplusFrontiers in Immunology|April 4, 2022
A Coarse-Grained Model of Affinity Maturation Indicates the Importance of B-Cell Receptor Avidity in Epitope SubdominanceVictor Ovchinnikov, Martin KarplusProceedings of the National Academy of Sciences of the United States of America|January 25, 2008
How subunit coupling produces the gamma-subunit rotary motion in F1-ATPaseJingzhi Pu, Martin KarplusPageof 41