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BMC Research Notes
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September 22, 2023
MEGADOCK-on-Colab: an easy-to-use protein-protein docking tool on Google Colaboratory
Masahito Ohue
Biophysics and Physicobiology
|
September 3, 2025
Protein-ligand affinity prediction via Jensen-Shannon divergence of molecular dynamics simulation trajectories
Kodai Igarashi, Masahito Ohue
Biomedicines
|
July 27, 2022
Solubility-Aware Protein Binding Peptide Design Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
Journal of Chemical Information and Modeling
|
October 22, 2025
ALLM-Ab: Active Learning-Driven Antibody Optimization Using Fine-Tuned Protein Language Models
Kairi Furui, Masahito Ohue
International Journal of Molecular Sciences
|
October 23, 2021
Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
Takatsugu Kosugi, Masahito Ohue
International Journal of Molecular Sciences
|
September 9, 2023
Design of Cyclic Peptides Targeting Protein-Protein Interactions Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
Communications Chemistry
|
April 5, 2024
Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX
Apakorn Kengkanna, Masahito Ohue
ACS Omega
|
March 31, 2025
Benchmarking HelixFold3-Predicted Holo Structures for Relative Free Energy Perturbation Calculations
Kairi Furui, Masahito Ohue
Computational and Structural Biotechnology Journal
|
November 19, 2025
SpatialPPIv2: Enhancing protein-protein interaction prediction through graph neural networks with protein language models
Wenxing Hu, Masahito Ohue
Computational and Structural Biotechnology Journal
|
March 28, 2024
SpatialPPI: Three-dimensional space protein-protein interaction prediction with AlphaFold Multimer
Wenxing Hu, Masahito Ohue
Page
of 6
Search research articles
Search
Showing results (1-10 of 53) with videos related to
Sort By:
Page
of 6
BMC Research Notes
|
September 22, 2023
MEGADOCK-on-Colab: an easy-to-use protein-protein docking tool on Google Colaboratory
Masahito Ohue
Biophysics and Physicobiology
|
September 3, 2025
Protein-ligand affinity prediction via Jensen-Shannon divergence of molecular dynamics simulation trajectories
Kodai Igarashi, Masahito Ohue
Biomedicines
|
July 27, 2022
Solubility-Aware Protein Binding Peptide Design Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
Journal of Chemical Information and Modeling
|
October 22, 2025
ALLM-Ab: Active Learning-Driven Antibody Optimization Using Fine-Tuned Protein Language Models
Kairi Furui, Masahito Ohue
International Journal of Molecular Sciences
|
October 23, 2021
Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
Takatsugu Kosugi, Masahito Ohue
International Journal of Molecular Sciences
|
September 9, 2023
Design of Cyclic Peptides Targeting Protein-Protein Interactions Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
Communications Chemistry
|
April 5, 2024
Enhancing property and activity prediction and interpretation using multiple molecular graph representations with MMGX
Apakorn Kengkanna, Masahito Ohue
ACS Omega
|
March 31, 2025
Benchmarking HelixFold3-Predicted Holo Structures for Relative Free Energy Perturbation Calculations
Kairi Furui, Masahito Ohue
Computational and Structural Biotechnology Journal
|
November 19, 2025
SpatialPPIv2: Enhancing protein-protein interaction prediction through graph neural networks with protein language models
Wenxing Hu, Masahito Ohue
Computational and Structural Biotechnology Journal
|
March 28, 2024
SpatialPPI: Three-dimensional space protein-protein interaction prediction with AlphaFold Multimer
Wenxing Hu, Masahito Ohue
Page
of 6