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Physical Review Research|February 12, 2024
Thermodynamic stability and critical points in multicomponent mixtures with structured interactionsIsabella R Graf, Benjamin B Machta
Proceedings of the National Academy of Sciences of the United States of America|February 6, 2020
Energy dissipation bounds for autonomous thermodynamic cyclesSamuel J Bryant, Benjamin B Machta
Arxiv|May 22, 2023
A bifurcation integrates information from many noisy ion channelsIsabella R Graf, Benjamin B Machta
Biorxiv : the Preprint Server for Biology|November 28, 2024
High fitness paths can connect proteins with low sequence overlapPranav Kantroo, Günter P Wagner, Benjamin B Machta
Arxiv|May 2, 2025
In-Context Learning can distort the relationship between sequence likelihoods and biological fitnessPranav Kantroo, Günter P Wagner, Benjamin B Machta
Arxiv|July 23, 2024
Pseudo-perplexity in One Fell Swoop for Protein Fitness EstimationPranav Kantroo, Günter P Wagner, Benjamin B Machta
Arxiv|November 28, 2024
High fitness paths can connect proteins with low sequence overlapPranav Kantroo, Günter P Wagner, Benjamin B Machta
Biorxiv : the Preprint Server for Biology|July 19, 2024
Pseudo-perplexity in One Fell Swoop for Protein Fitness EstimationPranav Kantroo, Günter P Wagner, Benjamin B Machta
Physical Review Letters|April 7, 2010
Why are nonlinear fits to data so challenging?Mark K Transtrum, Benjamin B Machta, James P Sethna
Nature Communications|January 16, 2021
Irreversibility in dynamical phases and transitionsDaniel S Seara, Benjamin B Machta, Michael P Murrell
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