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NAR Genomics and Bioinformatics|December 20, 2024
TSS-Captur: a user-friendly pipeline for characterizing unclassified RNA transcriptsMathias Witte Paz, Thomas Vogel, Kay NieseltPlos One|March 13, 2026
TSSpredator-Web: A web-application for transcription start site prediction and explorationMathias Witte Paz, Alexander Herbig, Kay NieseltBioinformatics Advances|January 26, 2023
Evidente-a visual analytics tool for data enrichment in SNP-based phylogenetic treesMathias Witte Paz, Theresa A Harbig, Kay NieseltNAR Genomics and Bioinformatics|December 19, 2025
A landscape of metallophore synthesis and uptake potential of the genus StaphylococcusMathias Witte Paz, Alina Bitzer, Kay Nieselt, et al.Journal of Proteome Research|January 8, 2025
PTMVision: An Interactive Visualization Webserver for Post-translational Modifications of ProteinsSimon Hackl, Caroline Jachmann, Mathias Witte Paz, et al.Msphere|November 24, 2025
Beyond commensalism: genomic insights into micrococcin P1-producing Staphylococcus chromogenesSamane Rahmdel, Tolga Türkoglu, Nastaran Nikjoo, et al.Briefings in Bioinformatics|August 3, 2025
Approaching the holistic transcriptome-convolution and deconvolution in transcriptomicsMaik Wolfram-Schauerte, Thomas Vogel, Hanati Tuoken, et al.BMC Bioinformatics|February 2, 2011
nocoRNAc: characterization of non-coding RNAs in prokaryotesAlexander Herbig, Kay NieseltPlos One|February 10, 2011
Mayday SeaSight: combined analysis of deep sequencing and microarray dataFlorian Battke, Kay NieseltNucleic Acids Research|September 9, 2005
Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomesStephan Steigele, Kay NieseltPageof 26