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Biorxiv : the Preprint Server for Biology|August 1, 2026
Programming protein shape as an explicit design layer via CAD blueprint-guided diffusionYilun Qi, Guoxun Zhang, Klaus Yserentant, et al.Biorxiv : the Preprint Server for Biology|April 27, 2026
A Hybrid Physics-Deep Learning Framework for Combinatorial De Novo Design of Small-Molecule Binding ProteinsConnor V Galvin, Amy B Guo, Maple N Chen, et al.Proceedings of the National Academy of Sciences of the United States of America|March 10, 2012
Control of protein signaling using a computationally designed GTPase/GEF orthogonal pairGregory T Kapp, Sen Liu, Amelie Stein, et al.Journal of Chemical Theory and Computation|April 14, 2015
Combined covalent-electrostatic model of hydrogen bonding improves structure prediction with RosettaMatthew J O'Meara, Andrew Leaver-Fay, Michael D Tyka, et al.Journal of Neuroimaging : Official Journal of the American Society of Neuroimaging|November 16, 2011
Optimal imaging of in vitro clot sonothrombolysis by MR-guided focused ultrasoundChristopher Durst, Stephen Monteith, Jason Sheehan, et al.Proceedings of the National Academy of Sciences of the United States of America|July 26, 2006
Structural basis for unique mechanisms of folding and hemoglobin binding by a malarial proteaseStephanie X Wang, Kailash C Pandey, John R Somoza, et al.Cell|September 3, 2011
A mechanism for tunable autoinhibition in the structure of a human Ca2+/calmodulin- dependent kinase II holoenzymeLuke H Chao, Margaret M Stratton, Il-Hyung Lee, et al.Elife|July 8, 2017
Deconstruction of the Ras switching cycle through saturation mutagenesisPradeep Bandaru, Neel H Shah, Moitrayee Bhattacharyya, et al.Proceedings of the National Academy of Sciences of the United States of America|March 7, 2022
Accurate positioning of functional residues with robotics-inspired computational protein designCody Krivacic, Kale Kundert, Xingjie Pan, et al.Science (New York, N.Y.)|February 12, 2026
Structural ontogeny of protein-protein interactionsAerin Yang, Hanlun Jiang, Kevin M Jude, et al.Pageof 13