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NAR Genomics and Bioinformatics|December 25, 2023
Restrander: rapid orientation and artefact removal for long-read cDNA dataJakob Schuster, Matthew E Ritchie, Quentin GouilGigascience|February 16, 2021
long-read-tools.org: an interactive catalogue of analysis methods for long-read sequencing dataShanika L Amarasinghe, Matthew E Ritchie, Quentin GouilBiostatistics (Oxford, England)|December 11, 2008
Microarray background correction: maximum likelihood estimation for the normal-exponential convolutionJeremy D Silver, Matthew E Ritchie, Gordon K SmythBioinformatics (Oxford, England)|June 26, 2007
beadarray: R classes and methods for Illumina bead-based dataMark J Dunning, Mike L Smith, Matthew E Ritchie, et al.BMC Bioinformatics|March 10, 2011
Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChipsMatthew E Ritchie, Ruijie Liu, Benilton S Carvalho, et al.BMC Biology|October 1, 2024
VEGF-dependent testicular vascularisation involves MEK1/2 signalling and the essential angiogenesis factors, SOX7 and SOX17Rheannon O Blücher, Rachel S Lim, Matthew E Ritchie, et al.NAR Genomics and Bioinformatics|January 6, 2022
Dashboard-style interactive plots for RNA-seq analysis are R Markdown ready with Glimma 2.0Hasaru Kariyawasam, Shian Su, Oliver Voogd, et al.BMC Bioinformatics|June 3, 2014
KRLMM: an adaptive genotype calling method for common and low frequency variantsRuijie Liu, Zhiyin Dai, Meredith Yeager, et al.BMC Bioinformatics|November 12, 2009
Illumina WG-6 BeadChip strips should be normalized separatelyWei Shi, Ashish Banerjee, Matthew E Ritchie, et al.Genomics Data|March 17, 2016
Transcriptional profiling of the epigenetic regulator Smchd1Ruijie Liu, Kelan Chen, Natasha Jansz, et al.Pageof 13