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Nature Methods|October 13, 2020
DeepC: predicting 3D genome folding using megabase-scale transfer learningRon Schwessinger, Matthew Gosden, Damien Downes, et al.Stem Cell Reports|December 30, 2019
Analysis of Differentiation Protocols Defines a Common Pancreatic Progenitor Molecular Signature and Guides Refinement of Endocrine DifferentiationAgata Wesolowska-Andersen, Rikke Rejnholdt Jensen, Marta Pérez Alcántara, et al.Nature Cell Biology|July 25, 2017
Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivoLars L P Hanssen, Mira T Kassouf, A Marieke Oudelaar, et al.Nature Communications|June 17, 2022
The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatinJulia Truch, Damien J Downes, Caroline Scott, et al.Nature Communications|June 3, 2020
Dynamics of the 4D genome during in vivo lineage specification and differentiationA Marieke Oudelaar, Robert A Beagrie, Matthew Gosden, et al.Nature Communications|January 25, 2025
The α-globin super-enhancer acts in an orientation-dependent mannerMira T Kassouf, Helena S Francis, Matthew Gosden, et al.Nature Communications|September 6, 2017
Editing an α-globin enhancer in primary human hematopoietic stem cells as a treatment for β-thalassemiaSachith Mettananda, Chris A Fisher, Deborah Hay, et al.Haematologica|October 30, 2020
Recapitulation of erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I) identifies defects in differentiation and nucleolar abnormalitiesCaroline Scott, Damien J Downes, Jill M Brown, et al.Pageof 1