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Biotechnology Journal|July 29, 2010
Metabolic systems analysis to advance algal biotechnologyBrian J Schmidt, Xiefan Lin-Schmidt, Austin Chamberlin, et al.Plos Computational Biology|June 24, 2015
Inference of Network Dynamics and Metabolic Interactions in the Gut MicrobiomeSteven N Steinway, Matthew B Biggs, Thomas P Loughran, et al.Msystems|June 22, 2021
Untargeted Metabolomics Reveals Species-Specific Metabolite Production and Shared Nutrient Consumption by Pseudomonas aeruginosa and Staphylococcus aureusLaura J Dunphy, Kassandra L Grimes, Nishikant Wase, et al.Elife|July 31, 2026
Benchmarking biochemical networks generated by large language modelsJeevan Tewari, Benjamin W Dahl, B Adam Bates, et al.NPJ Systems Biology and Applications|October 9, 2021
An updated genome-scale metabolic network reconstruction of Pseudomonas aeruginosa PA14 to characterize mucin-driven shifts in bacterial metabolismDawson D Payne, Alina Renz, Laura J Dunphy, et al.Trends in Biochemical Sciences|May 27, 2003
Metabolic pathways in the post-genome eraJason A Papin, Nathan D Price, Sharon J Wiback, et al.Biorxiv : the Preprint Server for Biology|October 24, 2023
Model-driven characterization of functional diversity of Pseudomonas aeruginosa clinical isolates with broadly representative phenotypesMohammad Mazharul Islam, Glynis L Kolling, Emma M Glass, et al.Journal of Theoretical Biology|October 25, 2003
Network-based analysis of metabolic regulation in the human red blood cellNathan D Price, Jennifer L Reed, Jason A Papin, et al.BMC Bioinformatics|January 26, 2008
Predicting biological system objectives de novo from internal state measurementsErwin P Gianchandani, Matthew A Oberhardt, Anthony P Burgard, et al.Tissue Engineering|August 29, 2007
Mechanistic exploration of phthalimide neovascular factor 1 using network analysis toolsKristen A Wieghaus, Erwin P Gianchandani, Milton L Brown, et al.Pageof 15