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American Journal of Botany|December 17, 2011
Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematicsShannon C K Straub, Matthew Parks, Kevin Weitemier, et al.American Journal of Botany|February 8, 2012
Targeted enrichment strategies for next-generation plant biologyRichard Cronn, Brian J Knaus, Aaron Liston, et al.Genome Biology and Evolution|December 21, 2012
Low diversity in the mitogenome of sperm whales revealed by next-generation sequencingAlana Alexander, Debbie Steel, Beth Slikas, et al.Journal of Applied Microbiology|May 16, 2024
Variable effects of captivity on microbiomes in populations of IUCN-endangered Blanding's turtles (Emydoidea blandingii)Lauren Jenkins, Donald T McKnight, Matthew Parks, et al.Genome Biology and Evolution|June 1, 2018
Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta)Wilson X Guillory, Anastasiia Onyshchenko, Elizabeth C Ruck, et al.BMC Genomics|May 6, 2011
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencingShannon C K Straub, Mark Fishbein, Tatyana Livshultz, et al.Arxiv|April 17, 2026
An Open-Source, Open Data Approach to Activity Classification from Triaxial Accelerometry in an Ambulatory SettingSepideh Nikookar, Edward Tian, Harrison Hoffman, et al.Genome Biology and Evolution|February 27, 2024
Ancient and Modern Genomes Reveal Microsatellites Maintain a Dynamic Equilibrium Through Deep TimeBennet J McComish, Michael A Charleston, Matthew Parks, et al.Journal of Phycology|November 10, 2025
Reference genome for the benthic marine diatom Psammoneis japonica: Bacterial associations and repeat-driven genome size evolution in diatomsWade R Roberts, Matthew Parks, Marissa Ashner, et al.NPJ Genomic Medicine|December 9, 2021
The salivary metatranscriptome as an accurate diagnostic indicator of oral cancerGuruduth Banavar, Oyetunji Ogundijo, Ryan Toma, et al.Pageof 3