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BMC Cancer
|
April 25, 2019
Protein interaction disruption in cancer
Matthew Ruffalo, Ziv Bar-Joseph
Bioinformatics (Oxford, England)
|
September 3, 2016
Genome wide predictions of miRNA regulation by transcription factors
Matthew Ruffalo, Ziv Bar-Joseph
Plos Computational Biology
|
December 20, 2015
Network-Based Integration of Disparate Omic Data To Identify "Silent Players" in Cancer
Matthew Ruffalo, Mehmet Koyutürk, Roded Sharan
Bioinformatics (Oxford, England)
|
August 23, 2011
Comparative analysis of algorithms for next-generation sequencing read alignment
Matthew Ruffalo, Thomas LaFramboise, Mehmet Koyutürk
Nucleic Acids Research
|
February 10, 2023
Using single cell atlas data to reconstruct regulatory networks
Qi Song, Matthew Ruffalo, Ziv Bar-Joseph
Bioinformatics (Oxford, England)
|
September 11, 2012
Accurate estimation of short read mapping quality for next-generation genome sequencing
Matthew Ruffalo, Mehmet Koyutürk, Soumya Ray, et al.
Methods (San Diego, Calif.)
|
July 30, 2025
3DCellComposer - A versatile pipeline utilizing 2D cell segmentation methods for 3D cell segmentation
Haoran Chen, Ted Zhang, Matthew Ruffalo, et al.
Genome Research
|
February 18, 2025
A unified analysis of atlas single-cell data
Hao Chen, Nam D Nguyen, Matthew Ruffalo, et al.
BMC Systems Biology
|
October 12, 2017
Reconstructing cancer drug response networks using multitask learning
Matthew Ruffalo, Petar Stojanov, Venkata Krishna Pillutla, et al.
Nature Communications
|
November 15, 2018
A web server for comparative analysis of single-cell RNA-seq data
Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada, et al.
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Search research articles
Search
Showing results (1-10 of 20) with videos related to
Sort By:
Page
of 2
BMC Cancer
|
April 25, 2019
Protein interaction disruption in cancer
Matthew Ruffalo, Ziv Bar-Joseph
Bioinformatics (Oxford, England)
|
September 3, 2016
Genome wide predictions of miRNA regulation by transcription factors
Matthew Ruffalo, Ziv Bar-Joseph
Plos Computational Biology
|
December 20, 2015
Network-Based Integration of Disparate Omic Data To Identify "Silent Players" in Cancer
Matthew Ruffalo, Mehmet Koyutürk, Roded Sharan
Bioinformatics (Oxford, England)
|
August 23, 2011
Comparative analysis of algorithms for next-generation sequencing read alignment
Matthew Ruffalo, Thomas LaFramboise, Mehmet Koyutürk
Nucleic Acids Research
|
February 10, 2023
Using single cell atlas data to reconstruct regulatory networks
Qi Song, Matthew Ruffalo, Ziv Bar-Joseph
Bioinformatics (Oxford, England)
|
September 11, 2012
Accurate estimation of short read mapping quality for next-generation genome sequencing
Matthew Ruffalo, Mehmet Koyutürk, Soumya Ray, et al.
Methods (San Diego, Calif.)
|
July 30, 2025
3DCellComposer - A versatile pipeline utilizing 2D cell segmentation methods for 3D cell segmentation
Haoran Chen, Ted Zhang, Matthew Ruffalo, et al.
Genome Research
|
February 18, 2025
A unified analysis of atlas single-cell data
Hao Chen, Nam D Nguyen, Matthew Ruffalo, et al.
BMC Systems Biology
|
October 12, 2017
Reconstructing cancer drug response networks using multitask learning
Matthew Ruffalo, Petar Stojanov, Venkata Krishna Pillutla, et al.
Nature Communications
|
November 15, 2018
A web server for comparative analysis of single-cell RNA-seq data
Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada, et al.
Page
of 2