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Plos Computational Biology|August 8, 2022
Insertions and deletions as phylogenetic signal in an alignment-free contextNiklas Birth, Thomas Dencker, Burkhard MorgensternGenome Biology|August 24, 2006
AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genomeMario Stanke, Ana Tzvetkova, Burkhard MorgensternBioinformatics (Oxford, England)|March 2, 2010
A min-cut algorithm for the consistency problem in multiple sequence alignmentEduardo Corel, Florian Pitschi, Burkhard MorgensternBioinformatics (Oxford, England)|October 10, 2003
Divide-and-conquer multiple alignment with segment-based constraintsMichael Sammeth, Burkhard Morgenstern, Jens StoyeAlgorithms for Molecular Biology : AMB|November 8, 2008
Stability of multiple alignments and phylogenetic trees: an analysis of ABC-transporter proteins familyHolger Wagner, Burkhard Morgenstern, Andreas DressBMC Bioinformatics|February 12, 2021
S-conLSH: alignment-free gapped mapping of noisy long readsAngana Chakraborty, Burkhard Morgenstern, Sanghamitra BandyopadhyayNucleic Acids Research|June 4, 2009
OrthoSelect: a web server for selecting orthologous gene alignments from EST sequencesFabian Schreiber, Gert Wörheide, Burkhard MorgensternNucleic Acids Research|June 25, 2004
The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequencesMichael Brudno, Rasmus Steinkamp, Burkhard MorgensternAlgorithms for Molecular Biology : AMB|December 15, 2017
Phylogeny reconstruction based on the length distribution of k-mismatch common substringsBurkhard Morgenstern, Svenja Schöbel, Chris-André LeimeisterBioinformatics (Oxford, England)|July 12, 2018
Accurate multiple alignment of distantly related genome sequences using filtered spaced word matches as anchor pointsChris-André Leimeister, Thomas Dencker, Burkhard MorgensternPageof 8