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Plos Genetics|February 15, 2013
DNA-methylome analysis of mouse intestinal adenoma identifies a tumour-specific signature that is partly conserved in human colon cancerChristina Grimm, Lukas Chavez, Mireia Vilardell, et al.Nucleic Acids Research|June 13, 2014
ARH-seq: identification of differential splicing in RNA-seq dataAxel Rasche, Matthias Lienhard, Marie-Laure Yaspo, et al.Journal of Translational Medicine|June 27, 2021
Large-scale literature mining to assess the relation between anti-cancer drugs and cancer typesChris Bauer, Ralf Herwig, Matthias Lienhard, et al.Cancers|August 26, 2022
Pre-Training on In Vitro and Fine-Tuning on Patient-Derived Data Improves Deep Neural Networks for Anti-Cancer Drug-Sensitivity PredictionPaul Prasse, Pascal Iversen, Matthias Lienhard, et al.NAR Genomics and Bioinformatics|April 29, 2024
Cancer drug sensitivity estimation using modular deep Graph Neural NetworksPedro A Campana, Paul Prasse, Matthias Lienhard, et al.Nature Cell Biology|April 28, 2015
The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosineJean-Pierre Etchegaray, Lukas Chavez, Yun Huang, et al.NAR Genomics and Bioinformatics|January 20, 2022
Matching anticancer compounds and tumor cell lines by neural networks with ranking lossPaul Prasse, Pascal Iversen, Matthias Lienhard, et al.Genes & Development|February 15, 2018
Dynamic EBF1 occupancy directs sequential epigenetic and transcriptional events in B-cell programmingRui Li, Pierre Cauchy, Senthilkumar Ramamoorthy, et al.BMC Bioinformatics|February 2, 2019
InTAD: chromosome conformation guided analysis of enhancer target genesKonstantin Okonechnikov, Serap Erkek, Jan O Korbel, et al.Biorxiv : the Preprint Server for Biology|March 18, 2026
Detecting Extrachromosomal DNA from Routine HistopathologyMuhammad Anwaar Khalid, Michael Gratius, Christopher Brown, et al.Pageof 11