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NAR Genomics and Bioinformatics|November 24, 2025
Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populationsMaureen Berg, Taylor Reiter, Joanne Emerson, et al.Msystems|May 24, 2019
A Viral Ecogenomics Framework To Uncover the Secrets of Nature's "Microbe Whisperers"Simon RouxCurrent Biology : CB|July 31, 2018
Nutrient- and Dose-Dependent Microbiome-Mediated Protection against a Plant PathogenMaureen Berg, Britt KoskellaThe ISME Journal|January 16, 2021
Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactionsMaureen Berg, Danielle Goudeau, Charles Olmsted, et al.Current Opinion in Virology|June 14, 2021
Global overview and major challenges of host prediction methods for uncultivated phagesClément Coclet, Simon RouxNature Reviews. Genetics|July 21, 2025
Viromics approaches for the study of viral diversity and ecology in microbiomesSimon Roux, Clement CocletCurrent Opinion in Microbiology|October 10, 2024
Tapping the treasure trove of atypical phagesSimon Roux, Vivek K MutalikTrends in Microbiology|June 1, 2022
Diversity in the soil virosphere: to infinity and beyond?Simon Roux, Joanne B EmersonJournal of Visualized Experiments : Jove|April 2, 2014
Automated separation of C. elegans variably colonized by a bacterial pathogenKwame Twumasi-Boateng, Maureen Berg, Michael ShapiraFrontiers in Microbiology|November 2, 2016
Host-Specific Functional Significance of Caenorhabditis Gut CommensalsMaureen Berg, Xiao Ying Zhou, Michael ShapiraPageof 20