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Plos Computational Biology|October 14, 2021
Segmentation and genome annotation algorithms for identifying chromatin state and other genomic patternsMaxwell W Libbrecht, Rachel C W Chan, Michael M HoffmanBioinformatics (Oxford, England)|October 14, 2017
Segway 2.0: Gaussian mixture models and minibatch trainingRachel C W Chan, Maxwell W Libbrecht, Eric G Roberts, et al.Proceedings of the ... International Conference on Machine Learning. International Conference on Machine Learning|November 1, 2024
Entropic Graph-based Posterior RegularizationMaxwell W Libbrecht, Michael M Hoffman, Jeffrey A Bilmes, et al.Genome Research|February 14, 2015
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expressionMaxwell W Libbrecht, Ferhat Ay, Michael M Hoffman, et al.Genome Biology|August 30, 2019
A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell typesMaxwell W Libbrecht, Oscar L Rodriguez, Zhiping Weng, et al.Nature Reviews. Genetics|May 8, 2015
Machine learning applications in genetics and genomicsMaxwell W Libbrecht, William Stafford NobleBioinformatics (Oxford, England)|October 31, 2021
SigTools: exploratory visualization for genomic signalsShohre Masoumi, Maxwell W Libbrecht, Kay C WieseBioinformatics (Oxford, England)|December 10, 2024
VSS-Hi-C: variance-stabilized signals for chromatin contactsNeda Shokraneh Kenari, Faezeh Bayat, Maxwell W LibbrechtGenome Research|March 21, 2024
Robust chromatin state annotationMehdi Foroozandeh Shahraki, Marjan Farahbod, Maxwell W LibbrechtProteins|January 19, 2018
Choosing non-redundant representative subsets of protein sequence data sets using submodular optimizationMaxwell W Libbrecht, Jeffrey A Bilmes, William Stafford NoblePageof 7