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NAR Genomics and Bioinformatics|September 27, 2024
RNAMotifProfile: a graph-based approach to build RNA structural motif profilesMd Mahfuzur Rahaman, Shaojie ZhangNucleic Acids Research|March 11, 2021
RNAMotifContrast: a method to discover and visualize RNA structural motif subfamiliesShahidul Islam, Md Mahfuzur Rahaman, Shaojie ZhangBioinformatics (Oxford, England)|June 30, 2023
RNAMotifComp: a comprehensive method to analyze and identify structurally similar RNA motif familiesMd Mahfuzur Rahaman, Nabila Shahnaz Khan, Shaojie ZhangNAR Genomics and Bioinformatics|April 28, 2025
GINClus: RNA structural motif clustering using graph isomorphism networkNabila Shahnaz Khan, Md Mahfuzur Rahaman, Shaojie ZhangBioinformatics Advances|February 24, 2025
CRIBAR: a fast and flexible sgRNA design tool for CRISPR imagingXiaoli Chen, Md Mahfuzur Rahaman, Ardalan Naseri, et al.NAR Genomics and Bioinformatics|May 1, 2023
RNA-NRD: a non-redundant RNA structural dataset for benchmarking and functional analysisNabila Shahnaz Khan, Md Mahfuzur Rahaman, Shahidul Islam, et al.Pageof 1