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Briefings in Bioinformatics|February 22, 2024
CRISPR-DIPOFF: an interpretable deep learning approach for CRISPR Cas-9 off-target predictionMd Toufikuzzaman, Md Abul Hassan Samee, M Sohel RahmanBiomedical Physics & Engineering Express|June 24, 2021
3C-GAN: class-consistent CycleGAN for malaria domain adaptation modelAimon Rahman, M Sohel Rahman, M R C MahdyRecent Patents on DNA & Gene Sequences|September 15, 2012
Pattern matching in indeterminate and Arc-annotated sequencesMd Tanvir Islam Aumi, Tanaeem M Moosa, M Sohel RahmanComputers in Biology and Medicine|March 17, 2022
Revisiting segmentation of lung tumors from CT imagesFarhanaz Farheen, Md Salman Shamil, Nabil Ibtehaz, et al.International Journal of Genomics|September 21, 2017
HaVec: An Efficient de Bruijn Graph Construction Algorithm for Genome AssemblyMd Mahfuzer Rahman, Ratul Sharker, Sajib Biswas, et al.BMC Bioinformatics|November 28, 2025
Revisiting motif finding: do bi-objective metaheuristics surpass single-objective metaheuristics?Muhammad Ali Nayeem, Shehab Sarar Ahmed, Suliman Aladhadh, et al.PNAS Nexus|June 30, 2025
GraphAge: Unleashing the power of graph neural network to decode epigenetic agingSaleh Sakib Ahmed, Nahian Shabab, Abul Hassan Samee, et al.Briefings in Bioinformatics|March 2, 2026
ORANGE: a machine learning approach for modeling tissue-specific aging from transcriptomic dataWasif Jalal, Mubasshira Musarrat, Md Abul Hassan Samee, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 28, 2011
The 1.375 approximation algorithm for sorting by transpositions can run in O(n log n) timeJesun Sahariar Firoz, Masud Hasan, Ashik Zinnat Khan, et al.Artificial Intelligence in Medicine|November 30, 2017
isGPT: An optimized model to identify sub-Golgi protein types using SVM and Random Forest based feature selectionM Saifur Rahman, Md Khaledur Rahman, M Kaykobad, et al.Pageof 8