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Methods in Molecular Biology (Clifton, N.J.)
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July 29, 2025
Multitask Learning-Based Approaches for Protein Function Prediction
Soufia Bahmani, Meenal Chaudhari, Callen Carrier, et al.
Current Opinion in Plant Biology
|
December 20, 2022
Compositionality, sparsity, spurious heterogeneity, and other data-driven challenges for machine learning algorithms within plant microbiome studies
Sebastiano Busato, Max Gordon, Meenal Chaudhari, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
July 29, 2025
Graph Neural Network-Based Approaches for Protein Function Prediction
Meenal Chaudhari, Soufia Bahmani, Pawel Pratyush, et al.
Bioinformatics (Oxford, England)
|
March 21, 2025
CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov-Arnold network
Pawel Pratyush, Callen Carrier, Suresh Pokharel, et al.
Molecular Omics
|
June 20, 2020
DeepRMethylSite: a deep learning based approach for prediction of arginine methylation sites in proteins
Meenal Chaudhari, Niraj Thapa, Kaushik Roy, et al.
Journal of Proteome Research
|
July 17, 2023
LMPhosSite: A Deep Learning-Based Approach for General Protein Phosphorylation Site Prediction Using Embeddings from the Local Window Sequence and Pretrained Protein Language Model
Subash C Pakhrin, Suresh Pokharel, Pawel Pratyush, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
July 2, 2025
A Survey of Pretrained Protein Language Models
Suresh Pokharel, Pawel Pratyush, Meenal Chaudhari, et al.
BMC Bioinformatics
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April 24, 2020
DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction
Niraj Thapa, Meenal Chaudhari, Sean McManus, et al.
BMC Bioinformatics
|
August 21, 2022
Correction: DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction
Niraj Thapa, Meenal Chaudhari, Sean McManus, et al.
Frontiers in Cell and Developmental Biology
|
July 12, 2021
DTL-DephosSite: Deep Transfer Learning Based Approach to Predict Dephosphorylation Sites
Meenal Chaudhari, Niraj Thapa, Hamid Ismail, et al.
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Showing results (1-10 of 14) with videos related to
Sort By:
Page
of 2
Methods in Molecular Biology (Clifton, N.J.)
|
July 29, 2025
Multitask Learning-Based Approaches for Protein Function Prediction
Soufia Bahmani, Meenal Chaudhari, Callen Carrier, et al.
Current Opinion in Plant Biology
|
December 20, 2022
Compositionality, sparsity, spurious heterogeneity, and other data-driven challenges for machine learning algorithms within plant microbiome studies
Sebastiano Busato, Max Gordon, Meenal Chaudhari, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
July 29, 2025
Graph Neural Network-Based Approaches for Protein Function Prediction
Meenal Chaudhari, Soufia Bahmani, Pawel Pratyush, et al.
Bioinformatics (Oxford, England)
|
March 21, 2025
CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov-Arnold network
Pawel Pratyush, Callen Carrier, Suresh Pokharel, et al.
Molecular Omics
|
June 20, 2020
DeepRMethylSite: a deep learning based approach for prediction of arginine methylation sites in proteins
Meenal Chaudhari, Niraj Thapa, Kaushik Roy, et al.
Journal of Proteome Research
|
July 17, 2023
LMPhosSite: A Deep Learning-Based Approach for General Protein Phosphorylation Site Prediction Using Embeddings from the Local Window Sequence and Pretrained Protein Language Model
Subash C Pakhrin, Suresh Pokharel, Pawel Pratyush, et al.
Methods in Molecular Biology (Clifton, N.J.)
|
July 2, 2025
A Survey of Pretrained Protein Language Models
Suresh Pokharel, Pawel Pratyush, Meenal Chaudhari, et al.
BMC Bioinformatics
|
April 24, 2020
DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction
Niraj Thapa, Meenal Chaudhari, Sean McManus, et al.
BMC Bioinformatics
|
August 21, 2022
Correction: DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction
Niraj Thapa, Meenal Chaudhari, Sean McManus, et al.
Frontiers in Cell and Developmental Biology
|
July 12, 2021
DTL-DephosSite: Deep Transfer Learning Based Approach to Predict Dephosphorylation Sites
Meenal Chaudhari, Niraj Thapa, Hamid Ismail, et al.
Page
of 2