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Systematic Biology|December 24, 2021
The Frequency and Topology of PseudoorthologsMegan L Smith, Matthew W HahnGenetics|May 28, 2024
Selection leads to false inferences of introgression using popular methodsMegan L Smith, Matthew W HahnBioinformatics (Oxford, England)|September 5, 2023
Phylogenetic inference using generative adversarial networksMegan L Smith, Matthew W HahnSystematic Biology|January 28, 2026
Using gene trees with lineage-specific duplicates for phylogenetic inference mitigates the effects of long-branch attractionMegan L Smith, Matthew W HahnTrends in Genetics : TIG|September 14, 2020
New Approaches for Inferring Phylogenies in the Presence of ParalogsMegan L Smith, Matthew W HahnMolecular Biology and Evolution|June 1, 2022
Using all Gene Families Vastly Expands Data Available for Phylogenomic InferenceMegan L Smith, Dan Vanderpool, Matthew W HahnMolecular Phylogenetics and Evolution|April 2, 2024
Applications of machine learning in phylogeneticsYu K Mo, Matthew W Hahn, Megan L SmithSystematic Biology|July 10, 2021
Species Tree Inference Methods Intended to Deal with Incomplete Lineage Sorting Are Robust to the Presence of ParalogsZhi Yan, Megan L Smith, Peng Du, et al.Molecular Biology and Evolution|January 13, 2006
Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Accurate inference and estimation in population genomicsMatthew W Hahn, Pageof 23