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Frontiers in Molecular Biosciences|November 16, 2020
A Coarse-Grained Methodology Identifies Intrinsic Mechanisms That Dissociate Interacting Protein PairsHaleh Abdizadeh, Farzaneh Jalalypour, Ali Rana Atilgan, et al.Journal of Chemical Information and Modeling|May 16, 2017
Perturbation-Response Scanning Reveals Key Residues for Allosteric Control in Hsp70David Penkler, Özge Sensoy, Canan Atilgan, et al.Journal of Chemical Information and Modeling|May 16, 2026
Functional Calmodulin States Are Selected from an Electrostatically Tuned Free Energy LandscapeBusra Tayhan, Sila Horozoglu, Ali Rana Atilgan, et al.Journal of Enzyme Inhibition and Medicinal Chemistry|February 4, 2015
Perturbation response scanning specifies key regions in subtilisin serine protease for both function and stabilityHaleh Abdizadeh, Gokce Guven, Ali Rana Atilgan, et al.Journal of Chemical Theory and Computation|April 23, 2025
A Thermodynamic Cycle to Predict the Competitive Inhibition Outcomes of an Evolving EnzymeEbru Cetin, Haleh Abdizadeh, Ali Rana Atilgan, et al.Biorxiv : the Preprint Server for Biology|February 20, 2025
A thermodynamic cycle to predict the competitive inhibition outcomes of an evolving enzymeEbru Cetin, Haleh Abdizadeh, Ali Rana Atilgan, et al.Journal of Chemical Information and Modeling|February 23, 2019
Tuning Interaction Parameters of Thermoplastic Polyurethanes in a Binary Solvent To Achieve Precise Control over Microphase SeparationSenem Avaz Seven, Oguzhan Oguz, Yusuf Ziya Menceloglu, et al.Physical Chemistry Chemical Physics : PCCP|September 24, 2013
Molecular basis for solvent dependent morphologies observed on electrosprayed surfacesElif Ozden-Yenigun, Eren Simsek, Yusuf Ziya Menceloglu, et al.Journal of Chemical Information and Modeling|December 17, 2020
N-Terminus of the Third PDZ Domain of PSD-95 Orchestrates Allosteric Communication for Selective Ligand BindingTandac F Guclu, Nazli Kocatug, Ali Rana Atilgan, et al.Biopolymers|August 19, 2009
Understanding the mode of action of ThDP in benzoylformate decarboxylaseKevser Gocmen Topal, Canan Atilgan, Ayhan S Demir, et al.Pageof 6