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Virology|October 23, 2012
Ocean viruses: rigorously evaluating the metagenomic sample-to-sequence pipelineMelissa B Duhaime, Matthew B SullivanGenome Announcements|February 13, 2016
Six Pseudoalteromonas Strains Isolated from Surface Waters of Kabeltonne, Offshore Helgoland, North SeaMelissa B Duhaime, Antje Wichels, Matthew B SullivanPlos One|August 4, 2016
Microbes on a Bottle: Substrate, Season and Geography Influence Community Composition of Microbes Colonizing Marine Plastic DebrisSonja Oberbeckmann, A Mark Osborn, Melissa B DuhaimePlos Computational Biology|April 19, 2018
Biogeography and environmental conditions shape bacteriophage-bacteria networks across the human microbiomeGeoffrey D Hannigan, Melissa B Duhaime, Danai Koutra, et al.Peerj|May 17, 2021
Comparison of ultrafiltration and iron chloride flocculation in the preparation of aquatic viromes from contrasting sample typesKathryn Langenfeld, Kaitlyn Chin, Ariel Roy, et al.Environmental Microbiology|June 21, 2012
Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification methodMelissa B Duhaime, Li Deng, Bonnie T Poulos, et al.Nucleic Acids Research|March 4, 2025
Development of a quantitative metagenomic approach to establish quantitative limits and its application to virusesKathryn Langenfeld, Bridget Hegarty, Santiago Vidaurri, et al.Msphere|April 13, 2026
Novel machine learning-based approach to identify viral biomarkers of human respiratory emissions from oral and nasal metagenomesKathryn Langenfeld, Peter Arts, Abigail Monahan, et al.Mbio|November 22, 2018
Diagnostic Potential and Interactive Dynamics of the Colorectal Cancer ViromeGeoffrey D Hannigan, Melissa B Duhaime, Mack T Ruffin, et al.Frontiers in Microbiology|July 22, 2017
Comparative Omics and Trait Analyses of Marine Pseudoalteromonas Phages Advance the Phage OTU ConceptMelissa B Duhaime, Natalie Solonenko, Simon Roux, et al.Pageof 4