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Biochemistry|October 6, 2005
Mismatch-induced conformational distortions in polymerase beta support an induced-fit mechanism for fidelityKarunesh Arora, William A Beard, Samuel H Wilson, et al.Journal of Molecular Biology|October 29, 2008
Mismatched base-pair simulations for ASFV Pol X/DNA complexes help interpret frequent G*G misincorporationBenedetta A Sampoli Benítez, Karunesh Arora, Lisa Balistreri, et al.Proceedings of the National Academy of Sciences of the United States of America|May 8, 2023
Evolution of coronavirus frameshifting elements: Competing stem networks explain conservation and variabilityShuting Yan, Qiyao Zhu, Jenna Hohl, et al.Biophysical Journal|November 1, 2019
Mesoscale Modeling of Nucleosome-Binding Antibody PL2-6: Mono- versus Bivalent Chromatin ComplexesChristopher G Myers, Donald E Olins, Ada L Olins, et al.Journal of the American Chemical Society|July 9, 2004
Critical role of magnesium ions in DNA polymerase beta's closing and active site assemblyLinjing Yang, Karunesh Arora, William A Beard, et al.Biophysical Journal|June 11, 2004
Highly organized but pliant active site of DNA polymerase beta: compensatory mechanisms in mutant enzymes revealed by dynamics simulations and energy analysesLinjing Yang, William A Beard, Samuel H Wilson, et al.Bioinformatics (Oxford, England)|September 15, 2007
RagPools: RNA-As-Graph-Pools--a web server for assisting the design of structured RNA pools for in vitro selectionNamhee Kim, Jin Sup Shin, Shereef Elmetwaly, et al.Biophysical Journal|February 13, 2007
Differing conformational pathways before and after chemistry for insertion of dATP versus dCTP opposite 8-oxoG in DNA polymerase betaYanli Wang, Sujatha Reddy, William A Beard, et al.Proceedings of the National Academy of Sciences of the United States of America|March 5, 2014
Graph-based sampling for approximating global helical topologies of RNANamhee Kim, Christian Laing, Shereef Elmetwaly, et al.Quarterly Reviews of Biophysics|January 14, 2011
Biomolecularmodeling and simulation: a field coming of ageTamar Schlick, Rosana Collepardo-Guevara, Leif Arthur Halvorsen, et al.Pageof 18