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Journal of Molecular Biology|November 12, 2020
Nucleosome Clutches are Regulated by Chromatin Internal ParametersStephanie Portillo-Ledesma, Lucille H Tsao, Meghna Wagley, et al.
Proceedings of the National Academy of Sciences of the United States of America|January 21, 2016
Hierarchical looping of zigzag nucleosome chains in metaphase chromosomesSergei A Grigoryev, Gavin Bascom, Jenna M Buckwalter, et al.
The Journal of Neuroscience : the Official Journal of the Society for Neuroscience|February 28, 2014
Mir-592 regulates the induction and cell death-promoting activity of p75NTR in neuronal ischemic injuryKrithi Irmady, Katherine A Jackman, Victoria A Padow, et al.
Bioinformatics (Oxford, England)|February 14, 2004
RAG: RNA-As-Graphs database--concepts, analysis, and featuresHin Hark Gan, Daniela Fera, Julie Zorn, et al.
Nature|November 20, 2014
Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotideBret D Freudenthal, William A Beard, Lalith Perera, et al.
Nucleic Acids Research|June 4, 2025
Compromised two-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkersBrianna Kable, Stephanie Portillo-Ledesma, Evgenya Y Popova, et al.
Biorxiv : the Preprint Server for Biology|January 27, 2025
Compromised 2-start zigzag chromatin folding in immature mouse retina cells driven by irregularly spaced nucleosomes with short DNA linkersBrianna Kable, Stephanie Portillo-Ledesma, Evgenya Y Popova, et al.
Elife|November 4, 2021
Local chromatin fiber folding represses transcription and loop extrusion in quiescent cellsSarah G Swygert, Dejun Lin, Stephanie Portillo-Ledesma, et al.
Molecular Cell|August 9, 2024
Structural insights into the cooperative nucleosome recognition and chromatin opening by FOXA1 and GATA4Bing-Rui Zhou, Hanqiao Feng, Furong Huang, et al.
Cell Reports|January 13, 2021
Mesoscale Modeling and Single-Nucleosome Tracking Reveal Remodeling of Clutch Folding and Dynamics in Stem Cell DifferentiationPablo Aurelio Gómez-García, Stephanie Portillo-Ledesma, Maria Victoria Neguembor, et al.
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