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Bioinformatics (Oxford, England)|November 16, 2014
SplitMEM: a graphical algorithm for pan-genome analysis with suffix skipsShoshana Marcus, Hayan Lee, Michael C Schatz
Bioinformatics (Oxford, England)|October 27, 2020
Sapling: accelerating suffix array queries with learned data modelsMelanie Kirsche, Arun Das, Michael C Schatz
Bioinformatics (Oxford, England)|October 3, 2024
BEATRICE: Bayesian fine-mapping from summary data using deep variational inferenceSayan Ghosal, Michael C Schatz, Archana Venkataraman
Current Protocols in Bioinformatics|September 6, 2012
Genotyping in the cloud with CrossbowJames Gurtowski, Michael C Schatz, Ben Langmead
Biorxiv : the Preprint Server for Biology|February 9, 2026
AniAnn's: alignment-free annotation of tandem repeat arrays using fast average nucleotide identity estimatesAlexander Sweeten, Michael C Schatz, Adam M Phillippy
Gigascience|June 23, 2017
16GT: a fast and sensitive variant caller using a 16-genotype probabilistic modelRuibang Luo, Michael C Schatz, Steven L Salzberg
Genome Biology|May 2, 2012
Current challenges in de novo plant genome sequencing and assemblyMichael C Schatz, Jan Witkowski, W Richard McCombie
Genome Biology|March 18, 2008
Genome assembly forensics: finding the elusive mis-assemblyAdam M Phillippy, Michael C Schatz, Mihai Pop
Frontiers in Plant Science|June 21, 2021
Natural Genetic Diversity in Tomato Flavor GenesLara Pereira, Manoj Sapkota, Michael Alonge, et al.
Gigascience|December 7, 2020
iGenomics: Comprehensive DNA sequence analysis on your SmartphoneAspyn Palatnick, Bin Zhou, Elodie Ghedin, et al.
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