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Molecular Biology and Evolution|October 17, 2009
Fast and consistent estimation of species trees using supermatrix rooted triplesMichael DeGiorgio, James H DegnanSystematic Biology|August 31, 2013
Robustness to divergence time underestimation when inferring species trees from estimated gene treesMichael DeGiorgio, James H DegnanGenetics|July 22, 2011
Coalescence-time distributions in a serial founder model of human evolutionary historyMichael DeGiorgio, James H Degnan, Noah A RosenbergSystematic Biology|June 8, 2010
Properties of consensus methods for inferring species trees from gene treesJames H Degnan, Michael DeGiorgio, David Bryant, et al.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|February 21, 2013
Evaluating variations on the STAR algorithm for relative efficiency and sample sizes needed to reconstruct species treesJames H DegnanSystematic Biology|May 31, 2018
Modeling Hybridization Under the Network Multispecies CoalescentJames H DegnanBioinformatics (Oxford, England)|May 31, 2022
Trying out a million genes to find the perfect pair with RTISTGleb Zhelezov, James H DegnanBioinformatics (Oxford, England)|July 2, 2020
PRANC: ML species tree estimation from the ranked gene trees under coalescenceAnastasiia Kim, James H DegnanMolecular Phylogenetics and Evolution|April 8, 2021
Heuristics for unrooted, unranked, and ranked anomaly zones under birth-death modelsAnastasiia Kim, James H DegnanPageof 13