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Nucleic Acids Research|April 12, 2003
Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of modelsRonald Jansen, Harmen J Bussemaker, Mark GersteinCurrent Opinion in Chemical Biology|January 28, 2003
Ontologies for proteomics: towards a systematic definition of structure and function that scales to the genome levelNing Lan, Gaetano T Montelione, Mark GersteinJournal of Molecular Evolution|April 17, 2008
Rapid evolution by positive Darwinian selection in T-cell antigen CD4 in primatesZhengdong D Zhang, George Weinstock, Mark GersteinPlos Computational Biology|November 30, 2011
Construction and analysis of an integrated regulatory network derived from high-throughput sequencing dataChao Cheng, Koon-Kiu Yan, Woochang Hwang, et al.Proceedings of the National Academy of Sciences of the United States of America|March 3, 2010
Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencingJia Qian Wu, Lukas Habegger, Parinya Noisa, et al.Plant Molecular Biology|October 12, 2005
A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarrayViktor Stolc, Lei Li, Xiangfeng Wang, et al.BMC Evolutionary Biology|February 10, 2007
Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in humanZhaolei Zhang, Andy Wing Chun Pang, Mark GersteinBioinformatics (Oxford, England)|June 2, 2007
Total ancestry measure: quantifying the similarity in tree-like classification, with genomic applicationsHaiyuan Yu, Ronald Jansen, Gustavo Stolovitzky, et al.Pageof 84