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Scientific Reports|August 14, 2020
Pathway-specific model estimation for improved pathway annotation by network crosstalkMiguel Castresana-Aguirre, Erik L L Sonnhammer
Bioinformatics Advances|January 26, 2023
PathBIX-a web server for network-based pathway annotation with adaptive null modelsMiguel Castresana-Aguirre, Emma Persson, Erik L L Sonnhammer
Frontiers in Genetics|May 27, 2022
Benefits and Challenges of Pre-clustered Network-Based Pathway AnalysisMiguel Castresana-Aguirre, Dimitri Guala, Erik L L Sonnhammer
Bioinformatics (Oxford, England)|March 10, 2022
PathwAX II: network-based pathway analysis with interactive visualization of network crosstalkChristoph Ogris, Miguel Castresana-Aguirre, Erik L L Sonnhammer
Scientific Reports|June 27, 2020
RNA-seq reveals altered gene expression levels in proximal tubular cell cultures compared to renal cortex but not during early glucotoxicityLinnéa M Nilsson, Miguel Castresana-Aguirre, Lena Scott, et al.
NAR Genomics and Bioinformatics|December 2, 2022
TOPAS, a network-based approach to detect disease modules in a top-down fashionDavide Buzzao, Miguel Castresana-Aguirre, Dimitri Guala, et al.
Briefings in Bioinformatics|March 4, 2024
Benchmarking enrichment analysis methods with the disease pathway networkDavide Buzzao, Miguel Castresana-Aguirre, Dimitri Guala, et al.
Journal of Molecular Biology|February 4, 2021
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-SpecificityEmma Persson, Miguel Castresana-Aguirre, Davide Buzzao, et al.
Scientific Reports|October 20, 2021
Drug repurposing improves disease targeting 11-fold and can be augmented by network module targeting, applied to COVID-19Inés Rivero-García, Miguel Castresana-Aguirre, Luca Guglielmo, et al.
Breast Cancer Research : BCR|March 8, 2024
Clinically relevant gene signatures provide independent prognostic information in older breast cancer patientsMiguel Castresana-Aguirre, Annelie Johansson, Alexios Matikas, et al.
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