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Miguel Machuqueiro

Showing results (21-30 of 98) with videos related to

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Journal of Chemical Theory and Computation|June 16, 2025
Adding the AMBER 14SB Force Field to the Stochastic Titration CpHMD MethodJoão G N Sequeira, Adrian E Roitberg, Miguel Machuqueiro
Journal of Chemical Information and Modeling|March 18, 2026
Force Field and Membrane Patch Size Effects on Atomistic Models of Aquaporin-7Marta S P Batista, Miguel Machuqueiro, Bruno L Victor
The Journal of Physical Chemistry. B|December 4, 2012
Charge parametrization of the DvH-c3 heme group: validation using constant-(pH,E) molecular dynamics simulationsJoão Henriques, Paulo J Costa, Maria José Calhorda, et al.
Nucleic Acids Research|April 15, 2024
PypKa server: online pKa predictions and biomolecular structure preparation with precomputed data from PDB and AlphaFold DBPedro B P S Reis, Djork-Arné Clevert, Miguel Machuqueiro
Bioinformatics (Oxford, England)|July 14, 2021
pKPDB: a protein data bank extension database of pKa and pI theoretical valuesPedro B P S Reis, Djork-Arné Clevert, Miguel Machuqueiro
Journal of Chemical Theory and Computation|September 15, 2018
Biomolecular Simulations of Halogen Bonds with a GROMOS Force FieldRafael Nunes, Diogo Vila-Viçosa, Miguel Machuqueiro, et al.
Journal of Chemical Theory and Computation|August 19, 2020
Improved GROMOS 54A7 Charge Sets for Phosphorylated Tyr, Ser, and Thr to Deal with pH-Dependent Binding PhenomenaNuno F B Oliveira, Inês D S Pires, Miguel Machuqueiro
The Journal of Physical Chemistry. B|October 15, 2016
Exploring the Structural Properties of Positively Charged Peptide DendrimersLuís C S Filipe, Miguel Machuqueiro, Tamis Darbre, et al.
Journal of Chemical Theory and Computation|November 19, 2015
Protonation of DMPC in a Bilayer Environment Using a Linear Response ApproximationVitor H Teixeira, Diogo Vila-Viçosa, António M Baptista, et al.
The Journal of Physical Chemistry. B|April 13, 2026
Improving the Estimation of p<i>K</i><sub>a</sub> Values for All Titratable Amino Acids at the Water/Membrane InterfaceNuno F B Oliveira, Pedro B P S Reis, Miguel Machuqueiro
Pageof 10

Showing results (21-30 of 98) with videos related to

Sort By:
Pageof 10
Journal of Chemical Theory and Computation|June 16, 2025
Adding the AMBER 14SB Force Field to the Stochastic Titration CpHMD MethodJoão G N Sequeira, Adrian E Roitberg, Miguel Machuqueiro
Journal of Chemical Information and Modeling|March 18, 2026
Force Field and Membrane Patch Size Effects on Atomistic Models of Aquaporin-7Marta S P Batista, Miguel Machuqueiro, Bruno L Victor
The Journal of Physical Chemistry. B|December 4, 2012
Charge parametrization of the DvH-c3 heme group: validation using constant-(pH,E) molecular dynamics simulationsJoão Henriques, Paulo J Costa, Maria José Calhorda, et al.
Nucleic Acids Research|April 15, 2024
PypKa server: online pKa predictions and biomolecular structure preparation with precomputed data from PDB and AlphaFold DBPedro B P S Reis, Djork-Arné Clevert, Miguel Machuqueiro
Bioinformatics (Oxford, England)|July 14, 2021
pKPDB: a protein data bank extension database of pKa and pI theoretical valuesPedro B P S Reis, Djork-Arné Clevert, Miguel Machuqueiro
Journal of Chemical Theory and Computation|September 15, 2018
Biomolecular Simulations of Halogen Bonds with a GROMOS Force FieldRafael Nunes, Diogo Vila-Viçosa, Miguel Machuqueiro, et al.
Journal of Chemical Theory and Computation|August 19, 2020
Improved GROMOS 54A7 Charge Sets for Phosphorylated Tyr, Ser, and Thr to Deal with pH-Dependent Binding PhenomenaNuno F B Oliveira, Inês D S Pires, Miguel Machuqueiro
The Journal of Physical Chemistry. B|October 15, 2016
Exploring the Structural Properties of Positively Charged Peptide DendrimersLuís C S Filipe, Miguel Machuqueiro, Tamis Darbre, et al.
Journal of Chemical Theory and Computation|November 19, 2015
Protonation of DMPC in a Bilayer Environment Using a Linear Response ApproximationVitor H Teixeira, Diogo Vila-Viçosa, António M Baptista, et al.
The Journal of Physical Chemistry. B|April 13, 2026
Improving the Estimation of p<i>K</i><sub>a</sub> Values for All Titratable Amino Acids at the Water/Membrane InterfaceNuno F B Oliveira, Pedro B P S Reis, Miguel Machuqueiro
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