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Biochemical and Biophysical Research Communications|February 27, 2007
Construction of phylogenetic profiles based on the genetic distance of hundreds of genomesJingchun Sun, Zhongming ZhaoBMC Genomics|December 15, 2006
Directionality of point mutation and 5-methylcytosine deamination rates in the chimpanzee genomeCizhong Jiang, Zhongming ZhaoBioinformatics (Oxford, England)|March 17, 2005
SNPNB: analyzing neighboring-nucleotide biases on single nucleotide polymorphisms (SNPs)Fengkai Zhang, Zhongming ZhaoBiorxiv : the Preprint Server for Biology|September 2, 2025
Cytoplasmic dynamics are overlooked in single nuclei RNA-seq but can be rescued by CytoRescue, a generative AI model to recover cytoplasm enriched geneWankun Deng, Zhongming ZhaoGene|November 30, 2005
Sequence context analysis of 8.2 million single nucleotide polymorphisms in the human genomeZhongming Zhao, Fengkai ZhangBriefings in Bioinformatics|January 17, 2019
Graph- and rule-based learning algorithms: a comprehensive review of their applications for cancer type classification and prognosis using genomic dataSaurav Mallik, Zhongming ZhaoGenomics, Proteomics & Bioinformatics|December 16, 2022
NetBCE: An Interpretable Deep Neural Network for Accurate Prediction of Linear B-cell EpitopesHaodong Xu, Zhongming ZhaoScientific Reports|December 18, 2020
Detecting methylation signatures in neurodegenerative disease by density-based clustering of applications with reducing noiseSaurav Mallik, Zhongming ZhaoGenes|August 16, 2019
Multi-Objective Optimized Fuzzy Clustering for Detecting Cell Clusters from Single-Cell Expression ProfilesSaurav Mallik, Zhongming ZhaoJournal of the American Medical Informatics Association : JAMIA|March 20, 2014
Machine learning-based prediction of drug-drug interactions by integrating drug phenotypic, therapeutic, chemical, and genomic propertiesFeixiong Cheng, Zhongming ZhaoPageof 465