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Nature Communications
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January 21, 2025
Taming large-scale genomic analyses via sparsified genomics
Mohammed Alser, Julien Eudine, Onur Mutlu
Genome Biology
|
September 11, 2020
Metalign: efficient alignment-based metagenomic profiling via containment min hash
Nathan LaPierre, Mohammed Alser, Eleazar Eskin, et al.
Bioinformatics (Oxford, England)
|
March 30, 2019
Shouji: a fast and efficient pre-alignment filter for sequence alignment
Mohammed Alser, Hasan Hassan, Akash Kumar, et al.
Bioinformatics (Oxford, England)
|
December 14, 2020
SneakySnake: a fast and accurate universal genome pre-alignment filter for CPUs, GPUs and FPGAs
Mohammed Alser, Taha Shahroodi, Juan Gómez-Luna, et al.
Bioinformatics (Oxford, England)
|
June 3, 2017
GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping
Mohammed Alser, Hasan Hassan, Hongyi Xin, et al.
Frontiers in Public Health
|
July 5, 2022
COVIDHunter: COVID-19 Pandemic Wave Prediction and Mitigation via Seasonality Aware Modeling
Mohammed Alser, Jeremie S Kim, Nour Almadhoun Alserr, et al.
Bioinformatics (Oxford, England)
|
March 27, 2023
A framework for high-throughput sequence alignment using real processing-in-memory systems
Safaa Diab, Amir Nassereldine, Mohammed Alser, et al.
BMC Medical Education
|
November 20, 2020
Undergraduate medical students' attitudes towards medical errors and patient safety: a multi-center cross-sectional study in the Gaza Strip, Palestine
Mohammed Alser, Bettina Böttcher, Maha Alfaqawi, et al.
BMC Genomics
|
June 7, 2019
MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples
Nathan LaPierre, Serghei Mangul, Mohammed Alser, et al.
Bioinformatics (Oxford, England)
|
March 24, 2023
Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs
Joël Lindegger, Damla Senol Cali, Mohammed Alser, et al.
Page
of 6
Search research articles
Search
Showing results (1-10 of 51) with videos related to
Sort By:
Page
of 6
Nature Communications
|
January 21, 2025
Taming large-scale genomic analyses via sparsified genomics
Mohammed Alser, Julien Eudine, Onur Mutlu
Genome Biology
|
September 11, 2020
Metalign: efficient alignment-based metagenomic profiling via containment min hash
Nathan LaPierre, Mohammed Alser, Eleazar Eskin, et al.
Bioinformatics (Oxford, England)
|
March 30, 2019
Shouji: a fast and efficient pre-alignment filter for sequence alignment
Mohammed Alser, Hasan Hassan, Akash Kumar, et al.
Bioinformatics (Oxford, England)
|
December 14, 2020
SneakySnake: a fast and accurate universal genome pre-alignment filter for CPUs, GPUs and FPGAs
Mohammed Alser, Taha Shahroodi, Juan Gómez-Luna, et al.
Bioinformatics (Oxford, England)
|
June 3, 2017
GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping
Mohammed Alser, Hasan Hassan, Hongyi Xin, et al.
Frontiers in Public Health
|
July 5, 2022
COVIDHunter: COVID-19 Pandemic Wave Prediction and Mitigation via Seasonality Aware Modeling
Mohammed Alser, Jeremie S Kim, Nour Almadhoun Alserr, et al.
Bioinformatics (Oxford, England)
|
March 27, 2023
A framework for high-throughput sequence alignment using real processing-in-memory systems
Safaa Diab, Amir Nassereldine, Mohammed Alser, et al.
BMC Medical Education
|
November 20, 2020
Undergraduate medical students' attitudes towards medical errors and patient safety: a multi-center cross-sectional study in the Gaza Strip, Palestine
Mohammed Alser, Bettina Böttcher, Maha Alfaqawi, et al.
BMC Genomics
|
June 7, 2019
MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples
Nathan LaPierre, Serghei Mangul, Mohammed Alser, et al.
Bioinformatics (Oxford, England)
|
March 24, 2023
Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs
Joël Lindegger, Damla Senol Cali, Mohammed Alser, et al.
Page
of 6