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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 11, 2014
Finding alignments of conserved graphlets in protein interaction networksMu-Fen Hsieh, Sing-Hoi SzeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 9, 2025
An Exact Matching Method for 16S rRNA Taxonomy ClassificationSing-Hoi SzeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|May 11, 2011
Motif finding in DNA sequences based on skipping nonconserved positions in background Markov chainsXiaoyan Zhao, Sing-Hoi SzeGenome Research|April 9, 2008
Large-scale analysis of gene clustering in bacteriaQingwu Yang, Sing-Hoi SzeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|July 30, 2008
Multiple sequence alignment based on profile alignment of intermediate sequencesYue Lu, Sing-Hoi SzeBMC Bioinformatics|July 25, 2008
Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elementsQingwu Yang, Sing-Hoi SzeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|March 27, 2007
Path matching and graph matching in biological networksQingwu Yang, Sing-Hoi SzeNucleic Acids Research|December 6, 2008
Improving accuracy of multiple sequence alignment algorithms based on alignment of neighboring residuesYue Lu, Sing-Hoi SzeBMC Genomics|August 2, 2014
A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq dataSing-Hoi Sze, Aaron M TaroneJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 7, 2006
A polynomial time solvable formulation of multiple sequence alignmentSing-Hoi Sze, Yue Lu, Qingwu YangPageof 6