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Proteomics|September 15, 2018
MaSS-Simulator: A Highly Configurable Simulator for Generating MS/MS Datasets for Benchmarking of Proteomics AlgorithmsMuaaz Gul Awan, Fahad SaeedBioinformatics (Oxford, England)|January 24, 2016
MS-REDUCE: an ultrafast technique for reduction of big mass spectrometry data for high-throughput processingMuaaz Gul Awan, Fahad SaeedACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine|September 5, 2017
An Out-of-Core GPU based dimensionality reduction algorithm for Big Mass Spectrometry Data and its application in bottom-up ProteomicsMuaaz Gul Awan, Fahad SaeedComputers in Biology and Medicine|August 27, 2018
GPU-DAEMON: GPU algorithm design, data management & optimization template for array based big omics dataMuaaz Gul Awan, Taban Eslami, Fahad SaeedNetwork Modeling and Analysis in Health Informatics and Bioinformatics|May 20, 2021
Benchmarking mass spectrometry based proteomics algorithms using a simulated databaseMuaaz Gul Awan, Abdullah Gul Awan, Fahad SaeedHigh-Throughput|April 21, 2018
Fast-GPU-PCC: A GPU-Based Technique to Compute Pairwise Pearson's Correlation Coefficients for Time Series Data-fMRI StudyTaban Eslami, Fahad SaeedFrontiers in Computational Neuroscience|April 26, 2021
ASD-SAENet: A Sparse Autoencoder, and Deep-Neural Network Model for Detecting Autism Spectrum Disorder (ASD) Using fMRI DataFahad Almuqhim, Fahad SaeedProceedings. IEEE International Conference on Bioinformatics and Biomedicine|July 18, 2024
ASD-GResTM: Deep Learning Framework for ASD classification using Gramian Angular FieldFahad Almuqhim, Fahad SaeedProceedings of the ... ICPP Workshops On. International Conference on Parallel Processing Workshops|April 20, 2022
TurboBC: A Memory Efficient and Scalable GPU Based Betweenness Centrality Algorithm in the Language of Linear AlgebraOswaldo Artiles, Fahad SaeedNature Computational Science|November 1, 2021
High Performance Computing Framework for Tera-Scale Database Search of Mass Spectrometry DataMuhammad Haseeb, Fahad SaeedPageof 14