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Nucleic Acids Research|January 7, 2026
Uncovering coordinated pathway interactions through gene co-differential expression in yeastMuhammad Ibtisam Nasar, Syed Sabih Ur Rehman, Sascha Ott, et al.
Molecular Systems Biology|May 22, 2025
An enzyme activation network reveals extensive regulatory crosstalk between metabolic pathwaysSultana Mohammed Al Zubaidi, Muhammad Ibtisam Nasar, Richard A Notebaart, et al.
Briefings in Bioinformatics|July 7, 2025
Integrative systems biology approaches for analyzing microbiome dysbiosis and species interactionsSyed Sabih Ur Rehman, Muhammad Ibtisam Nasar, Cristina S Mesquita, et al.
Microbial Genomics|June 11, 2024
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and trainingEmma J Griffiths, Inês Mendes, Finlay Maguire, et al.
Microbial Genomics|December 12, 2023
Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applicationsRuth E Timme, Ilene Karsch-Mizrachi, Zahra Waheed, et al.
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