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Nucleic Acids Research|June 5, 2020
LocalSTAR3D: a local stack-based RNA 3D structural alignment toolXiaoli Chen, Nabila Shahnaz Khan, Shaojie ZhangBioinformatics (Oxford, England)|June 30, 2023
RNAMotifComp: a comprehensive method to analyze and identify structurally similar RNA motif familiesMd Mahfuzur Rahaman, Nabila Shahnaz Khan, Shaojie ZhangNAR Genomics and Bioinformatics|April 28, 2025
GINClus: RNA structural motif clustering using graph isomorphism networkNabila Shahnaz Khan, Md Mahfuzur Rahaman, Shaojie ZhangNAR Genomics and Bioinformatics|May 1, 2023
RNA-NRD: a non-redundant RNA structural dataset for benchmarking and functional analysisNabila Shahnaz Khan, Md Mahfuzur Rahaman, Shahidul Islam, et al.Pageof 1