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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 16, 2023
Speeding Up the Structural Analysis of Metabolic Network Models Using the Fredman-Khachiyan Algorithm BNafiseh Sedaghat, Tamon Stephen, Leonid Chindelevitch
Bioinformatics (Oxford, England)|September 13, 2019
MCS2: minimal coordinated supports for fast enumeration of minimal cut sets in metabolic networksReza Miraskarshahi, Hooman Zabeti, Tamon Stephen, et al.
Algorithms for Molecular Biology : AMB|August 11, 2021
INGOT-DR: an interpretable classifier for predicting drug resistance in M. tuberculosisHooman Zabeti, Nick Dexter, Amir Hosein Safari, et al.
Methods in Molecular Biology (Clifton, N.J.)|December 10, 2017
The MONGOOSE Rational Arithmetic ToolboxChristopher Le, Leonid Chindelevitch
Computational Biology and Chemistry|June 30, 2020
Computing the distribution of the Robinson-Foulds distanceMaryam Hayati, Leonid Chindelevitch
Algorithms for Molecular Biology : AMB|December 14, 2019
A cubic algorithm for the generalized rank median of three genomesLeonid Chindelevitch, Sean La, Joao Meidanis
Plos One|November 22, 2019
A new resolution function to evaluate tree shape statisticsMaryam Hayati, Bita Shadgar, Leonid Chindelevitch
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|November 13, 2009
Local optimization for global alignment of protein interaction networksLeonid Chindelevitch, Chung-Shou Liao, Bonnie Berger
BMC Bioinformatics|May 11, 2018
On the rank-distance median of 3 permutationsLeonid Chindelevitch, João Paulo Pereira Zanetti, João Meidanis
Nature Communications|October 8, 2014
An exact arithmetic toolbox for a consistent and reproducible structural analysis of metabolic network modelsLeonid Chindelevitch, Jason Trigg, Aviv Regev, et al.
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