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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 15, 2007
A patient-gene model for temporal expression profiles in clinical studiesNaftali Kaminski, Ziv Bar-JosephBioinformatics (Oxford, England)|July 1, 2008
Alignment and classification of time series gene expression in clinical studiesTien-ho Lin, Naftali Kaminski, Ziv Bar-JosephPlos Computational Biology|March 15, 2018
iDREM: Interactive visualization of dynamic regulatory networksJun Ding, James S Hagood, Namasivayam Ambalavanan, et al.Genome Research|January 11, 2018
Reconstructing differentiation networks and their regulation from time series single-cell expression dataJun Ding, Bruce J Aronow, Naftali Kaminski, et al.Proceedings of the National Academy of Sciences of the United States of America|August 30, 2013
Reconstructing dynamic microRNA-regulated interaction networksMarcel H Schulz, Kusum V Pandit, Christian L Lino Cardenas, et al.Elife|January 27, 2017
Selecting the most appropriate time points to profile in high-throughput studiesMichael Kleyman, Emre Sefer, Teodora Nicola, et al.Bioinformatics (Oxford, England)|May 8, 2004
Analyzing time series gene expression dataZiv Bar-JosephPlos Computational Biology|September 12, 2022
CINS: Cell Interaction Network inference from Single cell expression dataYe Yuan, Carlos Cosme, Taylor Sterling Adams, et al.BMC Bioinformatics|April 7, 2006
STEM: a tool for the analysis of short time series gene expression dataJason Ernst, Ziv Bar-JosephBioinformatics (Oxford, England)|May 1, 2019
Continuous-state HMMs for modeling time-series single-cell RNA-Seq dataChieh Lin, Ziv Bar-JosephPageof 53