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ACS Synthetic Biology|April 26, 2021
Transcription-Factor-based Biosensor Engineering for Applications in Synthetic BiologyNana Ding, Shenghu Zhou, Yu DengSheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology|March 30, 2021
[Progress in transcription factor-based metabolite biosensors]Nana Ding, Shenghu Zhou, Yu DengACS Synthetic Biology|January 27, 2026
AI-Guided Design and Predictive Modeling of Synthetic Escherichia coli Promoters through Comprehensive -10/-35 Box EngineeringXuan Zhou, Nana Ding, Shenghu Zhou, et al.Bioresource Technology|March 31, 2023
Metabolic engineering and fermentation optimization strategies for producing organic acids of the tricarboxylic acid cycle by microbial cell factoriesShenghu Zhou, Nana Ding, Runhua Han, et al.Nucleic Acids Research|September 25, 2020
Programmable cross-ribosome-binding sites to fine-tune the dynamic range of transcription factor-based biosensorNana Ding, Zhenqi Yuan, Xiaojuan Zhang, et al.Nucleic Acids Research|September 3, 2025
Deep learning guided programmable design of Escherichia coli core promoters from sequence architecture to strength controlXuan Zhou, Renxu Feng, Nana Ding, et al.Computational and Structural Biotechnology Journal|January 12, 2024
Engineering an AI-based forward-reverse platform for the design of cross-ribosome binding sites of a transcription factor biosensorNana Ding, Guangkun Zhang, LinPei Zhang, et al.Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology|October 28, 2021
[Advances in denitrification microorganisms and processes]Xiaoqian Niu, Shenghu Zhou, Yu DengJournal of Biotechnology|October 29, 2025
Semi-rational design of the substrate-binding pocket of acyl-CoA dehydrogenase Tfu_1647 to improve catalytic activity for 6-carbon substratesLixia Liu, Shenghu Zhou, Yu DengApplied Microbiology and Biotechnology|August 25, 2020
The 3-ketoacyl-CoA thiolase: an engineered enzyme for carbon chain elongation of chemical compoundsLixia Liu, Shenghu Zhou, Yu DengPageof 187