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Scientific Reports
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March 18, 2021
Difference of binding modes among three ligands to a receptor mSin3B corresponding to their inhibitory activities
Tomonori Hayami, Narutoshi Kamiya, Kota Kasahara, et al.
Journal of Computational Chemistry
|
December 6, 2018
Improving the Accuracy of Protein-Ligand Binding Mode Prediction Using a Molecular Dynamics-Based Pocket Generation Approach
Mitsugu Araki, Hiroaki Iwata, Biao Ma, et al.
Journal of Chemical Information and Modeling
|
September 10, 2020
Molecular Interaction Mechanism of a 14-3-3 Protein with a Phosphorylated Peptide Elucidated by Enhanced Conformational Sampling
Junichi Higo, Takeshi Kawabata, Ayumi Kusaka, et al.
Biochemistry
|
August 16, 2018
Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca<sup>2+</sup>-Driven Catalytic Cycle
Nobutaka Numoto, Narutoshi Kamiya, Gert-Jan Bekker, et al.
Journal of Chemical Information and Modeling
|
February 10, 2026
Elucidating Ligand Charge Effects in MR1 Cell-Surface Translocation Using Molecular Simulations
Toshiki Fujii, Mitsugu Araki, Shigeyuki Matsumoto, et al.
Journal of Chemical Theory and Computation
|
December 26, 2023
Enhanced Coarse-Grained Molecular Dynamics Simulation with a Smoothed Hybrid Potential Using a Neural Network Model
Ryo Kanada, Atsushi Tokuhisa, Yusuke Nagasaka, et al.
Biophysics and Physicobiology
|
February 15, 2021
GA-guided mD-VcMD: A genetic-algorithm-guided method for multi-dimensional virtual-system coupled molecular dynamics
Junichi Higo, Ayumi Kusaka, Kota Kasahara, et al.
Scientific Reports
|
August 13, 2022
Fly casting with ligand sliding and orientational selection supporting complex formation of a GPCR and a middle sized flexible molecule
Junichi Higo, Kota Kasahara, Gert-Jan Bekker, et al.
Protein Science : a Publication of the Protein Society
|
September 4, 2023
Elucidation of binding mechanism, affinity, and complex structure between mWT1 tumor-associated antigen peptide and HLA-A*24:02
Gert-Jan Bekker, Nobutaka Numoto, Maki Kawasaki, et al.
Channels (Austin, Tex.)
|
August 12, 2008
Mutational analysis of block and facilitation of HERG current by a class III anti-arrhythmic agent, nifekalant
Yukio Hosaka, Miki Iwata, Narutoshi Kamiya, et al.
Page
of 7
Search research articles
Search
Showing results (51-60 of 62) with videos related to
Sort By:
Page
of 7
Scientific Reports
|
March 18, 2021
Difference of binding modes among three ligands to a receptor mSin3B corresponding to their inhibitory activities
Tomonori Hayami, Narutoshi Kamiya, Kota Kasahara, et al.
Journal of Computational Chemistry
|
December 6, 2018
Improving the Accuracy of Protein-Ligand Binding Mode Prediction Using a Molecular Dynamics-Based Pocket Generation Approach
Mitsugu Araki, Hiroaki Iwata, Biao Ma, et al.
Journal of Chemical Information and Modeling
|
September 10, 2020
Molecular Interaction Mechanism of a 14-3-3 Protein with a Phosphorylated Peptide Elucidated by Enhanced Conformational Sampling
Junichi Higo, Takeshi Kawabata, Ayumi Kusaka, et al.
Biochemistry
|
August 16, 2018
Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca<sup>2+</sup>-Driven Catalytic Cycle
Nobutaka Numoto, Narutoshi Kamiya, Gert-Jan Bekker, et al.
Journal of Chemical Information and Modeling
|
February 10, 2026
Elucidating Ligand Charge Effects in MR1 Cell-Surface Translocation Using Molecular Simulations
Toshiki Fujii, Mitsugu Araki, Shigeyuki Matsumoto, et al.
Journal of Chemical Theory and Computation
|
December 26, 2023
Enhanced Coarse-Grained Molecular Dynamics Simulation with a Smoothed Hybrid Potential Using a Neural Network Model
Ryo Kanada, Atsushi Tokuhisa, Yusuke Nagasaka, et al.
Biophysics and Physicobiology
|
February 15, 2021
GA-guided mD-VcMD: A genetic-algorithm-guided method for multi-dimensional virtual-system coupled molecular dynamics
Junichi Higo, Ayumi Kusaka, Kota Kasahara, et al.
Scientific Reports
|
August 13, 2022
Fly casting with ligand sliding and orientational selection supporting complex formation of a GPCR and a middle sized flexible molecule
Junichi Higo, Kota Kasahara, Gert-Jan Bekker, et al.
Protein Science : a Publication of the Protein Society
|
September 4, 2023
Elucidation of binding mechanism, affinity, and complex structure between mWT1 tumor-associated antigen peptide and HLA-A*24:02
Gert-Jan Bekker, Nobutaka Numoto, Maki Kawasaki, et al.
Channels (Austin, Tex.)
|
August 12, 2008
Mutational analysis of block and facilitation of HERG current by a class III anti-arrhythmic agent, nifekalant
Yukio Hosaka, Miki Iwata, Narutoshi Kamiya, et al.
Page
of 7