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Nathan C Sheffield

Showing results (21-30 of 65) with videos related to

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NAR Genomics and Bioinformatics|August 12, 2024
Methods for evaluating unsupervised vector representations of genomic regionsGuangtao Zheng, Julia Rymuza, Erfaneh Gharavi, et al.
Biorxiv : the Preprint Server for Biology|August 30, 2023
PEPhub: a database, web interface, and API for editing, sharing, and validating biological sample metadataNathan J LeRoy, Oleksandr Khoroshevskyi, Aaron O'Brien, et al.
Mitochondrial DNA|August 28, 2010
Mitochondrial genomics in Orthoptera using MOSASNathan C Sheffield, Kevin D Hiatt, Mark C Valentine, et al.
Gigascience|January 30, 2020
Refgenie: a reference genome resource managerMichał Stolarczyk, Vincent P Reuter, Jason P Smith, et al.
Gigascience|July 11, 2024
PEPhub: a database, web interface, and API for editing, sharing, and validating biological sample metadataNathan J LeRoy, Oleksandr Khoroshevskyi, Aaron O'Brien, et al.
Cell Reports|March 4, 2015
Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamicsMatthias Farlik, Nathan C Sheffield, Angelo Nuzzo, et al.
Genome Biology|September 7, 2020
COCOA: coordinate covariation analysis of epigenetic heterogeneityJohn T Lawson, Jason P Smith, Stefan Bekiranov, et al.
Bioinformatics (Oxford, England)|April 3, 2018
BART: a transcription factor prediction tool with query gene sets or epigenomic profilesZhenjia Wang, Mete Civelek, Clint L Miller, et al.
Biorxiv : the Preprint Server for Biology|November 24, 2025
Atacformer: A transformer-based foundation model for analysis and interpretation of ATAC-seq dataNathan J LeRoy, Guangtao Zheng, Oleksandr Khoroshevskyi, et al.
Genome Biology|May 16, 2021
PEPPRO: quality control and processing of nascent RNA profiling dataJason P Smith, Arun B Dutta, Kizhakke Mattada Sathyan, et al.
Pageof 7

Showing results (21-30 of 65) with videos related to

Sort By:
Pageof 7
NAR Genomics and Bioinformatics|August 12, 2024
Methods for evaluating unsupervised vector representations of genomic regionsGuangtao Zheng, Julia Rymuza, Erfaneh Gharavi, et al.
Biorxiv : the Preprint Server for Biology|August 30, 2023
PEPhub: a database, web interface, and API for editing, sharing, and validating biological sample metadataNathan J LeRoy, Oleksandr Khoroshevskyi, Aaron O'Brien, et al.
Mitochondrial DNA|August 28, 2010
Mitochondrial genomics in Orthoptera using MOSASNathan C Sheffield, Kevin D Hiatt, Mark C Valentine, et al.
Gigascience|January 30, 2020
Refgenie: a reference genome resource managerMichał Stolarczyk, Vincent P Reuter, Jason P Smith, et al.
Gigascience|July 11, 2024
PEPhub: a database, web interface, and API for editing, sharing, and validating biological sample metadataNathan J LeRoy, Oleksandr Khoroshevskyi, Aaron O'Brien, et al.
Cell Reports|March 4, 2015
Single-cell DNA methylome sequencing and bioinformatic inference of epigenomic cell-state dynamicsMatthias Farlik, Nathan C Sheffield, Angelo Nuzzo, et al.
Genome Biology|September 7, 2020
COCOA: coordinate covariation analysis of epigenetic heterogeneityJohn T Lawson, Jason P Smith, Stefan Bekiranov, et al.
Bioinformatics (Oxford, England)|April 3, 2018
BART: a transcription factor prediction tool with query gene sets or epigenomic profilesZhenjia Wang, Mete Civelek, Clint L Miller, et al.
Biorxiv : the Preprint Server for Biology|November 24, 2025
Atacformer: A transformer-based foundation model for analysis and interpretation of ATAC-seq dataNathan J LeRoy, Guangtao Zheng, Oleksandr Khoroshevskyi, et al.
Genome Biology|May 16, 2021
PEPPRO: quality control and processing of nascent RNA profiling dataJason P Smith, Arun B Dutta, Kizhakke Mattada Sathyan, et al.
Pageof 7