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The Journal of Physical Chemistry. B|August 14, 2020
Latent Models of Molecular Dynamics Data: Automatic Order Parameter Generation for Peptide FibrillizationNathaniel Charest, Michael Tro, Michael T Bowers, et al.The Journal of Physical Chemistry. B|June 1, 2019
The Classifying Autoencoder: Gaining Insight into Amyloid Assembly of Peptides and ProteinsMichael J Tro, Nathaniel Charest, Zachary Taitz, et al.Physical Chemistry Chemical Physics : PCCP|August 17, 2018
Conformational investigation of the structure-activity relationship of GdFFD and its analogues on an achatin-like neuropeptide receptor of Aplysia californica involved in the feeding circuitThanh D Do, James W Checco, Michael Tro, et al.Biophysical Journal|March 1, 2011
On the origin of the stronger binding of PIB over thioflavin T to protofibrils of the Alzheimer amyloid-β peptide: a molecular dynamics studyChun Wu, Michael T Bowers, Joan-Emma SheaPlos Computational Biology|March 12, 2010
Molecular structures of quiescently grown and brain-derived polymorphic fibrils of the Alzheimer amyloid abeta9-40 peptide: a comparison to agitated fibrilsChun Wu, Michael T Bowers, Joan-Emma SheaACS Chemical Neuroscience|December 3, 2015
Opposing Effects of Cucurbit[7]uril and 1,2,3,4,6-Penta-O-galloyl-β-d-glucopyranose on Amyloid β25-35 AssemblyNatália E C de Almeida, Thanh D Do, Michael Tro, et al.International Journal of Mass Spectrometry|October 24, 2017
1,2,3,4,6-penta-O-galloyl-β-D-glucopyranose Binds to the N-terminal Metal Binding Region to Inhibit Amyloid β-protein Oligomer and Fibril FormationNatália E C de Almeida, Thanh D Do, Nichole E LaPointe, et al.Journal of Computational Chemistry|February 26, 2017
Systematic derivation of implicit solvent models for the study of polymer collapseBin Song, Nathaniel Charest, Herbert Alexander Morriss-Andrews, et al.RNA (New York, N.Y.)|August 14, 2023
Discovering pathways through ribozyme fitness landscapes using information theoretic quantification of epistasisNathaniel Charest, Yuning Shen, Yei-Chen Lai, et al.Journal of the American Chemical Society|April 27, 2011
The amyloid formation mechanism in human IAPP: dimers have β-strand monomer-monomer interfacesNicholas F Dupuis, Chun Wu, Joan-Emma Shea, et al.Pageof 27