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Nucleic Acids Research|May 30, 2002
Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenesNathaniel Echols, Paul Harrison, Suganthi Balasubramanian, et al.
Pharmacogenomics|June 8, 2002
SNPs on human chromosomes 21 and 22 -- analysis in terms of protein features and pseudogenesSuganthi Balasubramanian, Paul Harrison, Hedi Hegyi, et al.
Genome Research|February 6, 2002
Molecular fossils in the human genome: identification and analysis of the pseudogenes in chromosomes 21 and 22Paul M Harrison, Hedi Hegyi, Suganthi Balasubramanian, et al.
Nucleic Acids Research|June 26, 2003
ExpressYourself: A modular platform for processing and visualizing microarray dataNicholas M Luscombe, Thomas E Royce, Paul Bertone, et al.
Acta Crystallographica. Section D, Biological Crystallography|May 7, 2015
Using support vector machines to improve elemental ion identification in macromolecular crystal structuresNader Morshed, Nathaniel Echols, Paul D Adams
Bioinformatics (Oxford, England)|January 15, 2011
AGE: defining breakpoints of genomic structural variants at single-nucleotide resolution, through optimal alignments with gap excisionAlexej Abyzov, Mark Gerstein
BMC Bioinformatics|January 13, 2004
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structuresVadim Alexandrov, Mark Gerstein
Proteins|March 30, 2004
A method using active-site sequence conservation to find functional shifts in protein families: application to the enzymes of central metabolism, leading to the identification of an anomalous isocitrate dehydrogenase in pathogensRajdeep Das, Mark Gerstein
Current Opinion in Microbiology|September 29, 2004
Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network predictionRonald Jansen, Mark Gerstein
Bioinformatics (Oxford, England)|July 25, 2024
Representing core gene expression activity relationships using the latent structure implicit in Bayesian networksJiahao Gao, Mark Gerstein
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