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Proceedings of the National Academy of Sciences of the United States of America|June 4, 2024
On the engulfment of antifreeze proteins by iceAniket U Thosar, Yusheng Cai, Sean M Marks, et al.Soft Matter|November 12, 2020
In search of a novel chassis material for synthetic cells: emergence of synthetic peptide compartmentBineet Sharma, Yutao Ma, Andrew L Ferguson, et al.Proceedings of the National Academy of Sciences of the United States of America|March 28, 2023
Disruption of energetic and dynamic base pairing cooperativity in DNA duplexes by an abasic siteBrennan Ashwood, Michael S Jones, Andrew L Ferguson, et al.Soft Matter|September 5, 2015
Machine learning assembly landscapes from particle tracking dataAndrew W Long, Jie Zhang, Steve Granick, et al.Bioorganic & Medicinal Chemistry|July 22, 2017
Machine learning-enabled discovery and design of membrane-active peptidesErnest Y Lee, Gerard C L Wong, Andrew L FergusonJournal of the American Chemical Society|October 13, 2021
Determining Sequence-Dependent DNA Oligonucleotide Hybridization and Dehybridization Mechanisms Using Coarse-Grained Molecular Simulation, Markov State Models, and Infrared SpectroscopyMichael S Jones, Brennan Ashwood, Andrei Tokmakoff, et al.Langmuir : the ACS Journal of Surfaces and Colloids|October 1, 2019
Controlling Supramolecular Chirality in Peptide-π-Peptide Networks by Variation of the Alkyl Spacer LengthSayak Subhra Panda, Kirill Shmilovich, Andrew L Ferguson, et al.Biophysical Journal|August 20, 2025
Prediction of αIIbβ3 integrin structures along its minimum free energy activation pathwaySiva Dasetty, Robert E Coffman, Tamara C Bidone, et al.Langmuir : the ACS Journal of Surfaces and Colloids|June 4, 2020
Computationally Guided Tuning of Amino Acid Configuration Influences the Chiroptical Properties of Supramolecular Peptide-π-Peptide NanostructuresSayak Subhra Panda, Kirill Shmilovich, Andrew L Ferguson, et al.The Journal of Chemical Physics|December 23, 2024
A modular and extensible CHARMM-compatible model for all-atom simulation of polypeptoidsAlex Berlaga, Kaylyn Torkelson, Aniruddha Seal, et al.Pageof 16