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Nika Mansouri Ghiasi

Showing results (1-10 of 8) with videos related to

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Bioinformatics (Oxford, England)|June 28, 2024
Label-guided seed-chain-extend alignment on annotated De Bruijn graphsHarun Mustafa, Mikhail Karasikov, Nika Mansouri Ghiasi, et al.
Bioinformatics (Oxford, England)|March 24, 2023
Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICsJoël Lindegger, Damla Senol Cali, Mohammed Alser, et al.
Bioinformatics (Oxford, England)|June 30, 2023
RawHash: enabling fast and accurate real-time analysis of raw nanopore signals for large genomesCan Firtina, Nika Mansouri Ghiasi, Joel Lindegger, et al.
Frontiers in Genetics|November 12, 2024
TargetCall: eliminating the wasted computation in basecalling via pre-basecalling filteringMeryem Banu Cavlak, Gagandeep Singh, Mohammed Alser, et al.
Bioinformatics (Oxford, England)|February 26, 2026
Rawsamble: Overlapping Raw Nanopore Signals using a Hash-based Seeding MechanismCan Firtina, Maximilian Mordig, Harun Mustafa, et al.
NAR Genomics and Bioinformatics|January 23, 2023
BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysisCan Firtina, Jisung Park, Mohammed Alser, et al.
Arxiv|October 3, 2025
A decentralized future for the open-science databasesGaurav Sharma, Viorel Munteanu, Nika Mansouri Ghiasi, et al.
Nature Reviews. Methods Primers|July 21, 2025
Analysis of metagenomic dataShaopeng Liu, Judith S Rodriguez, Viorel Munteanu, et al.
Pageof 1

Showing results (1-10 of 8) with videos related to

Sort By:
Pageof 1
Bioinformatics (Oxford, England)|June 28, 2024
Label-guided seed-chain-extend alignment on annotated De Bruijn graphsHarun Mustafa, Mikhail Karasikov, Nika Mansouri Ghiasi, et al.
Bioinformatics (Oxford, England)|March 24, 2023
Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICsJoël Lindegger, Damla Senol Cali, Mohammed Alser, et al.
Bioinformatics (Oxford, England)|June 30, 2023
RawHash: enabling fast and accurate real-time analysis of raw nanopore signals for large genomesCan Firtina, Nika Mansouri Ghiasi, Joel Lindegger, et al.
Frontiers in Genetics|November 12, 2024
TargetCall: eliminating the wasted computation in basecalling via pre-basecalling filteringMeryem Banu Cavlak, Gagandeep Singh, Mohammed Alser, et al.
Bioinformatics (Oxford, England)|February 26, 2026
Rawsamble: Overlapping Raw Nanopore Signals using a Hash-based Seeding MechanismCan Firtina, Maximilian Mordig, Harun Mustafa, et al.
NAR Genomics and Bioinformatics|January 23, 2023
BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysisCan Firtina, Jisung Park, Mohammed Alser, et al.
Arxiv|October 3, 2025
A decentralized future for the open-science databasesGaurav Sharma, Viorel Munteanu, Nika Mansouri Ghiasi, et al.
Nature Reviews. Methods Primers|July 21, 2025
Analysis of metagenomic dataShaopeng Liu, Judith S Rodriguez, Viorel Munteanu, et al.
Pageof 1