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Plos Computational Biology|January 24, 2014
Fast reconstruction of compact context-specific metabolic network modelsNikos Vlassis, Maria Pires Pacheco, Thomas SauterMethods in Molecular Biology (Clifton, N.J.)|December 10, 2017
The FASTCORE Family: For the Fast Reconstruction of Compact Context-Specific Metabolic Networks ModelsMaria Pires Pacheco, Thomas SauterBiochemical Society Transactions|May 6, 2020
Towards the routine use of in silico screenings for drug discovery using metabolic modellingTamara Bintener, Maria Pires Pacheco, Thomas SauterBriefings in Bioinformatics|November 29, 2015
Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyondThomas Pfau, Maria Pires Pacheco, Thomas SauterIscience|November 1, 2021
DCcov: Repositioning of drugs and drug combinations for SARS-CoV-2 infected lung through constraint-based modelingAli Kishk, Maria Pires Pacheco, Thomas SauterBriefings in Bioinformatics|May 3, 2024
Metabolic models predict fotemustine and the combination of eflornithine/rifamycin and adapalene/cannabidiol for the treatment of gliomasAli Kishk, Maria Pires Pacheco, Tony Heurtaux, et al.NPJ Systems Biology and Applications|January 23, 2021
A dynamic multi-tissue model to study human metabolismPatricia Martins Conde, Thomas Pfau, Maria Pires Pacheco, et al.Methods in Molecular Biology (Clifton, N.J.)|July 22, 2022
Drug Target Prediction Using Context-Specific Metabolic Models Reconstructed from rFASTCORMICSTamara Bintener, Maria Pires Pacheco, Ali Kishk, et al.Metabolites|December 23, 2022
scFASTCORMICS: A Contextualization Algorithm to Reconstruct Metabolic Multi-Cell Population Models from Single-Cell RNAseq DataMaria Pires Pacheco, Jimmy Ji, Tessy Prohaska, et al.Ebiomedicine|May 26, 2019
Identifying and targeting cancer-specific metabolism with network-based drug target predictionMaria Pires Pacheco, Tamara Bintener, Dominik Ternes, et al.Pageof 13