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Bioinformatics (Oxford, England)|December 18, 2009
r2cat: synteny plots and comparative assemblyPeter Husemann, Jens StoyeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 30, 2010
The solution space of sorting by DCJMarília D V Braga, Jens StoyeBMC Bioinformatics|January 25, 2005
Large scale hierarchical clustering of protein sequencesAntje Krause, Jens Stoye, Martin VingronMethods in Molecular Biology (Clifton, N.J.)|December 27, 2017
Pan-Genome Storage and Analysis TechniquesTina Zekic, Guillaume Holley, Jens StoyeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|September 30, 2010
Finding nested common intervals efficientlyGuillaume Blin, David Faye, Jens StoyeIEEE/ACM Transactions on Computational Biology and Bioinformatics|September 11, 2015
Sorting Linear Genomes with Rearrangements and IndelsMarília D V Braga, Jens StoyeBioinformatics (Oxford, England)|October 10, 2003
Divide-and-conquer multiple alignment with segment-based constraintsMichael Sammeth, Burkhard Morgenstern, Jens StoyeMethods in Molecular Biology (Clifton, N.J.)|December 27, 2017
Family-Free Genome ComparisonDaniel Doerr, Pedro Feijão, Jens StoyeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 7, 2006
On sorting by translocationsAnne Bergeron, Julia Mixtacki, Jens StoyeAlgorithms for Molecular Biology : AMB|June 7, 2025
Reconstructing rearrangement phylogenies of natural genomesLeonard Bohnenkämper, Jens Stoye, Daniel DoerrPageof 13