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Plos Computational Biology|May 28, 2026
BINSEQ: A family of high-performance binary formats for nucleotide sequencesNoam Teyssier, Alexander DobinMethods in Molecular Biology (Clifton, N.J.)|April 27, 2016
Optimizing RNA-Seq Mapping with STARAlexander Dobin, Thomas R GingerasCurrent Protocols in Bioinformatics|September 4, 2015
Mapping RNA-seq Reads with STARAlexander Dobin, Thomas R GingerasGenome Biology|August 11, 2019
Is it time to change the reference genome?Sara Ballouz, Alexander Dobin, Jesse A GillisGenome Research|March 8, 2022
Pan-human consensus genome significantly improves the accuracy of RNA-seq analysesBenjamin Kaminow, Sara Ballouz, Jesse Gillis, et al.Nucleic Acids Research|May 3, 2018
The fractured landscape of RNA-seq alignment: the default in our STARsSara Ballouz, Alexander Dobin, Thomas R Gingeras, et al.Stem Cell Reports|November 3, 2023
Identification of glioblastoma stem cell-associated lncRNAs using single-cell RNA sequencing datasetsRasmani Hazra, Raditya Utama, Payal Naik, et al.Genome Research|September 1, 2012
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expressionPhilippe Batut, Alexander Dobin, Charles Plessy, et al.Biorxiv : the Preprint Server for Biology|January 30, 2023
Identification of glioblastoma stem cell-associated lncRNAs using single-cell RNA-sequencing datasetsRasmani Hazra, Raditya Utama, Payal Naik, et al.Biorxiv : the Preprint Server for Biology|January 16, 2026
A genetic screen in enteroendocrine cells reveals mechanisms that control protein sensing and GLP-1 releaseShenliang Yu, Yoochae Lee, Steven C Boggess, et al.Pageof 4