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Plos One|September 9, 2014
Chromatin accessibility mapping identifies mediators of basal transcription and retinoid-induced repression of OTX2 in medulloblastomaMatthew Wortham, Changcun Guo, Monica Zhang, et al.Thorax|December 16, 2011
A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung functionJared M Bischof, Christopher J Ott, Shih-Hsing Leir, et al.Genome Research|April 3, 2004
Comparative recombination rates in the rat, mouse, and human genomesMichael I Jensen-Seaman, Terrence S Furey, Bret A Payseur, et al.American Journal of Physiology. Lung Cellular and Molecular Physiology|November 10, 2021
Integrative analysis reveals mouse strain-dependent responses to acute ozone exposure associated with airway macrophage transcriptional activityAdelaide Tovar, Wesley L Crouse, Gregory J Smith, et al.JCI Insight|February 7, 2023
Prdm6 drives ductus arteriosus closure by promoting ductus arteriosus smooth muscle cell identity and contractilityMeng Zou, Kevin D Mangum, Justin C Magin, et al.Scientific Reports|May 25, 2026
Reference-guided genome assembly of long non-coding rna transcripts reveals target genes associated with Crohn's diseaseMeaghan M Kennedy Ng, Sophie Silverstein, Nina C Nishiyama, et al.Biorxiv : the Preprint Server for Biology|November 19, 2025
Reference-guided Genome Assembly of Long Non-coding RNA Transcripts Reveals Target Genes Associated With Crohn's DiseaseMeaghan M Kennedy Ng, Sophie Silverstein, Nina C Nishiyama, et al.Plos Genetics|January 22, 2020
Integrative QTL analysis of gene expression and chromatin accessibility identifies multi-tissue patterns of genetic regulationGregory R Keele, Bryan C Quach, Jennifer W Israel, et al.Genome Research|November 18, 2011
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cellsBum-Kyu Lee, Akshay A Bhinge, Anna Battenhouse, et al.Environmental Health Perspectives|October 18, 2017
Variation in DNA-Damage Responses to an Inhalational Carcinogen (1,3-Butadiene) in Relation to Strain-Specific Differences in Chromatin Accessibility and Gene Transcription Profiles in C57BL/6J and CAST/EiJ MiceGrace A Chappell, Jennifer W Israel, Jeremy M Simon, et al.Pageof 9