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Methods in Enzymology|February 21, 2013
Using analyses of amino Acid coevolution to understand protein structure and functionOrr Ashenberg, Michael T LaubJournal of Molecular Biology|January 22, 2013
Helix bundle loops determine whether histidine kinases autophosphorylate in cis or in transOrr Ashenberg, Amy E Keating, Michael T LaubJournal of Molecular Biology|August 23, 2011
Determinants of homodimerization specificity in histidine kinasesOrr Ashenberg, Kathryn Rozen-Gagnon, Michael T Laub, et al.Plos Genetics|December 3, 2010
Systematic dissection and trajectory-scanning mutagenesis of the molecular interface that ensures specificity of two-component signaling pathwaysEmily J Capra, Barrett S Perchuk, Emma A Lubin, et al.Cell|June 17, 2008
Rewiring the specificity of two-component signal transduction systemsJeffrey M Skerker, Barrett S Perchuk, Albert Siryaporn, et al.Molecular Microbiology|October 20, 2012
Spatial tethering of kinases to their substrates relaxes evolutionary constraints on specificityEmily J Capra, Barrett S Perchuk, Orr Ashenberg, et al.Med (New York, N.Y.)|January 10, 2026
Bridging AI and biology: Foundation models meet human physiology and diseaseOrr Ashenberg, Ramnik J XavierProceedings of the National Academy of Sciences of the United States of America|December 31, 2005
A simple physical model for scaling in protein-protein interaction networksEric J Deeds, Orr Ashenberg, Eugene I ShakhnovichPlos Biology|July 19, 2016
Keeping Signals Straight: How Cells Process Information and Make DecisionsMichael T LaubMolecular Biology and Evolution|August 1, 2015
Site-Specific Amino Acid Preferences Are Mostly Conserved in Two Closely Related Protein HomologsMichael B Doud, Orr Ashenberg, Jesse D BloomPageof 18