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Environmental Science & Technology|September 3, 2024
Identifying Quinones in Complex Aqueous Environmental Media (Biochar Extracts) through Tagging with Cysteine and Cysteine-Contained Peptides and High Resolution Mass Spectrometry AnalysisAnil Timilsina, Srinidhi Lokesh, Abrar Shahriar, et al.Environmental Science & Technology|October 16, 2024
Two-Dimensional Liquid Chromatography Tandem Mass Spectrometry Untangles the Deep Metabolome of Marine Dissolved Organic MatterStilianos Papadopoulos Lambidis, Tilman Schramm, Karoline Steuer-Lodd, et al.ISME Communications|October 27, 2025
Strong pairwise interactions do not drive interactions in a plant leaf associated microbial communityFranziska Höhn, Vasvi Chaudhry, Caner Bağci, et al.The ISME Journal|December 18, 2025
Offensive role of the Bacillus extracellular matrix in driving metabolite-mediated dialogue and adaptive strategies with the fungus BotrytisAlicia I Pérez-Lorente, Carlos Molina-Santiago, David Vela-Corcía, et al.Analytical Chemistry|August 14, 2023
Evaluation of Data-Dependent MS/MS Acquisition Parameters for Non-Targeted Metabolomics and Molecular Networking of Environmental Samples: Focus on the Q Exactive PlatformPaolo Stincone, Abzer K Pakkir Shah, Robin Schmid, et al.Nature Protocols|May 20, 2024
Reproducible mass spectrometry data processing and compound annotation in MZmine 3Steffen Heuckeroth, Tito Damiani, Aleksandr Smirnov, et al.Biorxiv : the Preprint Server for Biology|March 27, 2026
Cooperative siderophore use stabilizes a protective leaf microbiomePaolo Stincone, Lukas M Braun, Caner Bağcı, et al.Nature Communications|August 8, 2022
Native metabolomics identifies the rivulariapeptolide family of protease inhibitorsRaphael Reher, Allegra T Aron, Pavla Fajtová, et al.Nature Protocols|September 20, 2024
Statistical analysis of feature-based molecular networking results from non-targeted metabolomics dataAbzer K Pakkir Shah, Axel Walter, Filip Ottosson, et al.Biorxiv : the Preprint Server for Biology|February 12, 2026
A searchable metadata network graph for microbiome metabolomicsVincent Charron-Lamoureux, Shipei Xing, Abubaker Patan, et al.Pageof 4