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Gigascience|October 17, 2022
CORAL: A framework for rigorous self-validated data modeling and integrative, reproducible data analysisPavel S Novichkov, John-Marc Chandonia, Adam P ArkinBMC Evolutionary Biology|June 24, 2006
PHOG: a database of supergenomes built from proteome complementsIgor V Merkeev, Pavel S Novichkov, Andrey A MironovJournal of Bacteriology|November 4, 2008
Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomesPavel S Novichkov, Yuri I Wolf, Inna Dubchak, et al.Frontiers in Microbiology|June 11, 2021
Binary Metabolic Phenotypes and Phenotype Diversity Metrics for the Functional Characterization of Microbial CommunitiesStanislav N Iablokov, Pavel S Novichkov, Andrei L Osterman, et al.Nucleic Acids Research|October 11, 2008
ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotesPavel S Novichkov, Igor Ratnere, Yuri I Wolf, et al.Nucleic Acids Research|June 25, 2004
SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteinsOlga V Kalinina, Pavel S Novichkov, Andrey A Mironov, et al.Molecular Microbiology|August 8, 2014
Chlorate reduction in Shewanella algae ACDC is a recently acquired metabolism characterized by gene loss, suboptimal regulation and oxidative stressIain C Clark, Ryan A Melnyk, Anthony T Iavarone, et al.Biology Direct|November 29, 2007
Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaeaKira S Makarova, Alexander V Sorokin, Pavel S Novichkov, et al.Proceedings of the National Academy of Sciences of the United States of America|April 9, 2009
The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent agesYuri I Wolf, Pavel S Novichkov, Georgy P Karev, et al.BMC Genomics|November 12, 2015
σ54-dependent regulome in Desulfovibrio vulgaris HildenboroughAlexey E Kazakov, Lara Rajeev, Amy Chen, et al.Pageof 5